| The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ... BMC bioinformatics 9, 1-8, 2008 | 3998 | 2008 |
| 1,135 genomes reveal the global pattern of polymorphism in Arabidopsis thaliana C Alonso-Blanco, J Andrade, C Becker, F Bemm, J Bergelson, ... Cell 166 (2), 481-491, 2016 | 1121 | 2016 |
| Epigenomic diversity in a global collection of Arabidopsis thaliana accessions T Kawakatsu, SSC Huang, F Jupe, E Sasaki, RJ Schmitz, MA Urich, ... Cell 166 (2), 492-505, 2016 | 625 | 2016 |
| FIGfams: yet another set of protein families F Meyer, R Overbeek, A Rodriguez Nucleic acids research 37 (20), 6643-6654, 2009 | 171 | 2009 |
| The grid2003 production grid: Principles and practice I Foster, J Gieraltowski, S Gose, N Maltsev, E May, A Rodriguez, ... Proceedings. 13th IEEE International Symposium on High performance …, 2004 | 165 | 2004 |
| PUMA2—grid-based high-throughput analysis of genomes and metabolic pathways N Maltsev, E Glass, D Sulakhe, A Rodriguez, MH Syed, T Bompada, ... Nucleic acids research 34 (suppl_1), D369-D372, 2006 | 86 | 2006 |
| Experiences building Globus Genomics: a next‐generation sequencing analysis service using Galaxy, Globus, and Amazon Web Services RK Madduri, D Sulakhe, L Lacinski, B Liu, A Rodriguez, K Chard, ... Concurrency and Computation: Practice and Experience 26 (13), 2266-2279, 2014 | 85 | 2014 |
| The Globus Galaxies platform: delivering science gateways as a service R Madduri, K Chard, R Chard, L Lacinski, A Rodriguez, D Sulakhe, ... Concurrency and Computation: Practice and Experience 27 (16), 4344-4360, 2015 | 60 | 2015 |
| Reproducible big data science: A case study in continuous FAIRness R Madduri, K Chard, M D’Arcy, SC Jung, A Rodriguez, D Sulakhe, ... PloS one 14 (4), e0213013, 2019 | 54 | 2019 |
| I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets K Chard, M D'Arcy, B Heavner, I Foster, C Kesselman, R Madduri, ... 2016 Ieee international conference on big data (big data), 319-328, 2016 | 51 | 2016 |
| Prevalence of inherited mutations in breast cancer predisposition genes among women in Uganda and Cameroon B Adedokun, Y Zheng, P Ndom, A Gakwaya, T Makumbi, AY Zhou, ... Cancer Epidemiology, Biomarkers & Prevention 29 (2), 359-367, 2020 | 50 | 2020 |
| LINE1 insertions as a genomic risk factor for schizophrenia: Preliminary evidence from an affected family G Guffanti, S Gaudi, T Klengel, JH Fallon, H Mangalam, R Madduri, ... American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 171 …, 2016 | 42 | 2016 |
| A case study for cloud based high throughput analysis of NGS data using the globus genomics system K Bhuvaneshwar, D Sulakhe, R Gauba, A Rodriguez, R Madduri, U Dave, ... Computational and structural biotechnology journal 13, 64-74, 2015 | 33 | 2015 |
| Atlas of transcription factor binding sites from ENCODE DNase hypersensitivity data across 27 tissue types CC Funk, AM Casella, S Jung, MA Richards, A Rodriguez, P Shannon, ... Cell reports 32 (7), 2020 | 31 | 2020 |
| Sentra: a database of signal transduction proteins for comparative genome analysis M D'Souza, EM Glass, MH Syed, Y Zhang, A Rodriguez, N Maltsev, ... Nucleic acids research 35 (suppl_1), D271-D273, 2007 | 30 | 2007 |
| Gnare: automated system for high-throughput genome analysis with grid computational backend D Sulakhe, A Rodriguez, M D'Souza, M Wilde, V Nefedova, I Foster, ... Journal of clinical monitoring and computing 19, 361-369, 2005 | 29 | 2005 |
| A novel MERTK mutation causing retinitis pigmentosa H Al-Khersan, KP Shah, SC Jung, A Rodriguez, RK Madduri, MA Grassi Graefe's Archive for Clinical and Experimental Ophthalmology 255, 1613-1619, 2017 | 28 | 2017 |
| Gnare: an environment for grid-based high-throughput genome analysis D Sulakhe, A Rodriguez, M D'Souza, M Wilde, V Nefedova, I Foster, ... CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid …, 2005 | 27 | 2005 |
| Consensus Genotyper for Exome Sequencing (CGES): improving the quality of exome variant genotypes V Trubetskoy, A Rodriguez, U Dave, N Campbell, EL Crawford, EH Cook, ... Bioinformatics 31 (2), 187-193, 2015 | 22 | 2015 |
| Enabling Multi-task computation on Galaxy-based Gateways using Swift K Maheshwari, A Rodriguez, D Kelly, R Madduri, J Wozniak, M Wilde, ... 2013 IEEE International Conference on Cluster Computing (CLUSTER), 1-3, 2013 | 21 | 2013 |
