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Daniela Puiu
Daniela Puiu
Verified email at jhu.edu - Homepage
Title
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Cited by
Year
A whole-genome assembly of the domestic cow, Bos taurus
AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ...
Genome biology 10, 1-10, 2009
13492009
The MaSuRCA genome assembler
AV Zimin, G Marçais, D Puiu, M Roberts, SL Salzberg, JA Yorke
Bioinformatics 29 (21), 2669-2677, 2013
13102013
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
8842012
The genome of Cryptosporidium hominis
P Xu, G Widmer, Y Wang, LS Ozaki, JM Alves, MG Serrano, D Puiu, ...
Nature 431 (7012), 1107-1112, 2004
6692004
The genome of Cryptosporidium hominis
P Xu, G Widmer, Y Wang, LS Ozaki, JM Alves, MG Serrano, D Puiu, ...
Nature 431 (7012), 1107-1112, 2004
6662004
Draft genome sequence of the oilseed species Ricinus communis
AP Chan, J Crabtree, Q Zhao, H Lorenzi, J Orvis, D Puiu, ...
Nature biotechnology 28 (9), 951-956, 2010
5792010
Genome sequence of the progenitor of the wheat D genome Aegilops tauschii
MC Luo, YQ Gu, D Puiu, H Wang, SO Twardziok, KR Deal, N Huo, T Zhu, ...
Nature 551 (7681), 498-502, 2017
5502017
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu, MW Crepeau, ...
Genome biology 15, 1-13, 2014
5392014
Sequencing of Culex quinquefasciatus Establishes a Platform for Mosquito Comparative Genomics
P Arensburger, K Megy, RM Waterhouse, J Abrudan, P Amedeo, B Antelo, ...
Science 330 (6000), 86-88, 2010
5292010
Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis
RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, L Ann Blomberg, ...
PLoS biology 8 (9), e1000475, 2010
4662010
Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A
SL Salzberg, DD Sommer, MC Schatz, AM Phillippy, PD Rabinowicz, ...
BMC genomics 9, 1-16, 2008
4232008
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire
CA Lévesque, H Brouwer, L Cano, JP Hamilton, C Holt, E Huitema, ...
Genome biology 11, 1-22, 2010
4222010
Sequencing and assembly of the 22-Gb loblolly pine genome
A Zimin, KA Stevens, MW Crepeau, A Holtz-Morris, M Koriabine, ...
Genetics 196 (3), 875-890, 2014
3862014
The genomes of two key bumblebee species with primitive eusocial organization
BM Sadd, SM Barribeau, G Bloch, DC De Graaf, P Dearden, CG Elsik, ...
Genome biology 16, 1-32, 2015
3852015
Genomic signatures of evolutionary transitions from solitary to group living
KM Kapheim, H Pan, C Li, SL Salzberg, D Puiu, T Magoc, HM Robertson, ...
Science 348 (6239), 1139-1143, 2015
3852015
Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm
AV Zimin, D Puiu, MC Luo, T Zhu, S Koren, G Marçais, JA Yorke, J Dvořák, ...
Genome research 27 (5), 787-792, 2017
3792017
Assembly of a pan-genome from deep sequencing of 910 humans of African descent
RM Sherman, J Forman, V Antonescu, D Puiu, M Daya, N Rafaels, ...
Nature genetics 51 (1), 30-35, 2019
3332019
Genome of the Opportunistic Pathogen Streptococcus sanguinis
P Xu, JM Alves, T Kitten, A Brown, Z Chen, LS Ozaki, P Manque, X Ge, ...
Journal of bacteriology 189 (8), 3166-3175, 2007
2952007
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
AV Zimin, D Puiu, R Hall, S Kingan, BJ Clavijo, SL Salzberg
Gigascience 6 (11), gix097, 2017
2862017
A draft human pangenome reference
WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ...
Nature 617 (7960), 312-324, 2023
2752023
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