| Wnt/wingless signaling requires BCL9/legless-mediated recruitment of pygopus to the nuclear β-catenin-TCF complex T Kramps, O Peter, E Brunner, D Nellen, B Froesch, S Chatterjee, ... Cell 109 (1), 47-60, 2002 | 773 | 2002 |
| pangolinencodes a Lef-1 homologue that acts downstream of Armadillo to transduce the Wingless signal in Drosophila E Brunner, O Peter, L Schweizer, K Basler Nature 385 (6619), 829-833, 1997 | 620 | 1997 |
| Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry F Desiere, EW Deutsch, AI Nesvizhskii, P Mallick, NL King, JK Eng, ... Genome biology 6, 1-12, 2005 | 378 | 2005 |
| A high-quality catalog of the Drosophila melanogaster proteome E Brunner, CH Ahrens, S Mohanty, H Baetschmann, S Loevenich, ... Nature biotechnology 25 (5), 576-583, 2007 | 323 | 2007 |
| Comparative functional analysis of the Caenorhabditis elegans and Drosophila melanogaster proteomes SP Schrimpf, M Weiss, L Reiter, CH Ahrens, M Jovanovic, J Malmström, ... PLoS biology 7 (3), e1000048, 2009 | 248 | 2009 |
| Generating and navigating proteome maps using mass spectrometry CH Ahrens, E Brunner, E Qeli, K Basler, R Aebersold Nature reviews Molecular cell biology 11 (11), 789-801, 2010 | 194 | 2010 |
| Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster S Goetze, E Qeli, C Mosimann, A Staes, B Gerrits, B Roschitzki, ... PLoS biology 7 (11), e1000236, 2009 | 181 | 2009 |
| Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function MA Grobei, E Qeli, E Brunner, H Rehrauer, R Zhang, B Roschitzki, ... Genome research 19 (10), 1786-1800, 2009 | 181 | 2009 |
| Proteomic analysis of synaptosomes using isotope‐coded affinity tags and mass spectrometry SP Schrimpf, V Meskenaite, E Brunner, D Rutishauser, P Walther, J Eng, ... Proteomics 5 (10), 2531-2541, 2005 | 146 | 2005 |
| Optimized peptide separation and identification for mass spectrometry based proteomics via free-flow electrophoresis J Malmström, H Lee, AI Nesvizhskii, D Shteynberg, S Mohanty, E Brunner, ... Journal of proteome research 5 (9), 2241-2249, 2006 | 99 | 2006 |
| A transcriptomics resource reveals a transcriptional transition during ordered sarcomere morphogenesis in flight muscle ML Spletter, C Barz, A Yeroslaviz, X Zhang, SB Lemke, A Bonnard, ... Elife 7, e34058, 2018 | 78 | 2018 |
| The comprehensive native interactome of a fully functional tagged prion protein D Rutishauser, KD Mertz, R Moos, E Brunner, T Rülicke, AM Calella, ... PLoS One 4 (2), e4446, 2009 | 77 | 2009 |
| The Hemolymph Proteome of Fed and Starved Drosophila Larvae B Handke, I Poernbacher, S Goetze, CH Ahrens, U Omasits, F Marty, ... PloS one 8 (6), e67208, 2013 | 68 | 2013 |
| A combined proteomic and genetic analysis identifies a role for the lipid desaturase Desat1 in starvation-induced autophagy in Drosophila K Köhler, E Brunner, XL Guan, K Boucke, UF Greber, S Mohanty, ... Autophagy 5 (7), 980-990, 2009 | 67 | 2009 |
| The Dominant MutationGlazedIs a Gain-of-Function Allele ofwinglessThat, Similar to Loss of APC, Interferes with Normal Eye Development E Brunner, D Brunner, W Fu, E Hafen, K Basler Developmental biology 206 (2), 178-188, 1999 | 50 | 1999 |
| Probing the canonicity of the Wnt/Wingless signaling pathway A Franz, D Shlyueva, E Brunner, A Stark, K Basler PLoS genetics 13 (4), e1006700, 2017 | 46 | 2017 |
| Essential downstream component of the wingless signaling pathway and therapeutic and diagnostic applications based thereon K Basler, E Brunner, B Froesch, T Kramps, O Peter US Patent 7,375,075, 2008 | 44 | 2008 |
| Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data E Qeli, U Omasits, S Goetze, DJ Stekhoven, JE Frey, K Basler, ... Journal of proteomics 108, 269-283, 2014 | 42 | 2014 |
| The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation SN Loevenich, E Brunner, NL King, EW Deutsch, SE Stein, ... BMC bioinformatics 10, 1-12, 2009 | 40 | 2009 |
| CRISPR-induced double-strand breaks trigger recombination between homologous chromosome arms E Brunner, R Yagi, M Debrunner, D Beck-Schneider, A Burger, E Escher, ... Life science alliance 2 (3), 2019 | 34 | 2019 |
