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Daniel J O'Shea
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Neocortical excitation/inhibition balance in information processing and social dysfunction
O Yizhar, LE Fenno, M Prigge, F Schneider, TJ Davidson, DJ O’Shea, ...
Nature 477 (7363), 171-178, 2011
20582011
Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins
J Mattis, KM Tye, EA Ferenczi, C Ramakrishnan, DJ O'Shea, R Prakash, ...
Nature methods 9 (2), 159-172, 2012
6982012
Inferring single-trial neural population dynamics using sequential auto-encoders
C Pandarinath, DJ O’Shea, J Collins, R Jozefowicz, SD Stavisky, JC Kao, ...
Nature Methods, 1, 2018
3252018
Accurate estimation of neural population dynamics without spike sorting
EM Trautmann, SD Stavisky, S Lahiri, KC Ames, MT Kaufman, DJ O’Shea, ...
Neuron 103 (2), 292-308. e4, 2019
1322019
A coaxial optrode as multifunction write-read probe for optogenetic studies in non-human primates
I Ozden, J Wang, Y Lu, T May, J Lee, W Goo, DJ O'Shea, P Kalanithi, ...
Journal of neuroscience methods 219 (1), 142-154, 2013
1012013
The need for calcium imaging in nonhuman primates: New motor neuroscience and brain-machine interfaces
DJ O'Shea, E Trautmann, C Chandrasekaran, S Stavisky, J Kao, ...
Experimental Neurology, 2016
412016
ERAASR: An algorithm for removing electrical stimulation artifacts from multielectrode array recordings
DJ O’Shea, KV Shenoy
Journal of neural engineering 15 (2), 026020, 2018
362018
An open resource for non-human primate optogenetics
S Tremblay, L Acker, A Afraz, DL Albaugh, H Amita, AR Andrei, ...
Neuron 108 (6), 1075-1090. e6, 2020
352020
Development of an optogenetic toolkit for neural circuit dissection in squirrel monkeys.
DJ O'Shea, P Kalanithi, EA Ferenczi, B Hsueh, C Chandrasekaran, ...
Scientific reports 8 (1), 6775-6775, 2018
272018
Causal role of motor preparation during error-driven learning
S Vyas, DJ O’Shea, SI Ryu, KV Shenoy
Neuron 106 (2), 329-339. e4, 2020
232020
Dendritic calcium signals in rhesus macaque motor cortex drive an optical brain-computer interface
EM Trautmann, DJ O’Shea, X Sun, JH Marshel, A Crow, B Hsueh, ...
Nature Communications 12 (1), 1-20, 2021
162021
Cortical preparatory activity indexes learned motor memories
X Sun, DJ O’Shea, MD Golub, EM Trautmann, S Vyas, SI Ryu, KV Shenoy
Nature, 1-6, 2022
7*2022
Design of an implantable artificial dural window for chronic two-photon optical imaging in non-human primates
E Trautmann, DJ O'Shea, S Shrestha, S Lin, S Ryu, K Shenoy
Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual …, 2015
72015
Novel Lossy Compression Algorithms with Stacked Autoencoders
A Atreya, D O’Shea
Stanford University CS229, Tech. Rep, 2009
72009
The Importance of Planning in Motor Learning
DJ O’Shea, KV Shenoy
Neuron 92 (4), 669-671, 2016
62016
Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortex
CC Kerr, DJ O'Shea, W Goo, S Dura-Bernal, JT Francis, I Diester, ...
BMC Neuroscience 15 (Suppl 1), P107, 2014
32014
Opsin stability under varying stimulation conditions
EA Ferenczi, J Mattis, C Ramakrishnan, KM Tye, DJ O'Shea, O Yizhar, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40, 67-67, 2011
2011
An analysis of new and existing opsins for scientific application
J Mattis, KM Tye, C Ramakrishnan, DJ O'Shea, LA Gunaydin, EA Ferenczi, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 40, 68-69, 2011
2011
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Articles 1–18