| SignalP 4.0: discriminating signal peptides from transmembrane regions TN Petersen, S Brunak, G Von Heijne, H Nielsen Nature methods 8 (10), 785-786, 2011 | 9485 | 2011 |
| SignalP 5.0 improves signal peptide predictions using deep neural networks JJ Almagro Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, ... Nature biotechnology 37 (4), 420-423, 2019 | 2663 | 2019 |
| A generic method for assignment of reliability scores applied to solvent accessibility predictions B Petersen, TN Petersen, P Andersen, M Nielsen, C Lundegaard BMC structural biology 9, 1-10, 2009 | 680 | 2009 |
| Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage RS Hendriksen, P Munk, P Njage, B Van Bunnik, L McNally, ... Nature communications 10 (1), 1124, 2019 | 462 | 2019 |
| CPHmodels-3.0—remote homology modeling using structure-guided sequence profiles M Nielsen, C Lundegaard, O Lund, TN Petersen Nucleic acids research 38 (suppl_2), W576-W581, 2010 | 422 | 2010 |
| Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries P Munk, BE Knudsen, O Lukjancenko, ASR Duarte, L Van Gompel, ... Nature microbiology 3 (8), 898-908, 2018 | 204 | 2018 |
| Prediction of protein secondary structure at 80% accuracy TN Petersen, C Lundegaard, M Nielsen, H Bohr, J Bohr, S Brunak, ... Proteins: Structure, Function, and Bioinformatics 41 (1), 17-20, 2000 | 200 | 2000 |
| The crystal structure of rhamnogalacturonase A from Aspergillus aculeatus: a right-handed parallel β helix TN Petersen, S Kauppinen, S Larsen Structure 5 (4), 533-544, 1997 | 175 | 1997 |
| Detection of mobile genetic elements associated with antibiotic resistance in Salmonella enterica using a newly developed web tool: MobileElementFinder MHK Johansson, V Bortolaia, S Tansirichaiya, FM Aarestrup, AP Roberts, ... Journal of Antimicrobial Chemotherapy 76 (1), 101-109, 2021 | 147 | 2021 |
| Improved metagenome binning and assembly using deep variational autoencoders JN Nissen, J Johansen, RL Allesøe, CK Sønderby, JJA Armenteros, ... Nature biotechnology 39 (5), 555-560, 2021 | 114 | 2021 |
| NetTurnP–neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features B Petersen, C Lundegaard, TN Petersen PloS one 5 (11), e15079, 2010 | 111 | 2010 |
| A systematic study of site-specific GalNAc-type O-glycosylation modulating proprotein convertase processing KTBG Schjoldager, MB Vester-Christensen, CK Goth, TN Petersen, ... Journal of Biological Chemistry 286 (46), 40122-40132, 2011 | 105 | 2011 |
| Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance T Nordahl Petersen, S Rasmussen, H Hasman, C Carøe, J Bælum, ... Scientific reports 5 (1), 1-9, 2015 | 78 | 2015 |
| Pancreatic spasmolytic polypeptide: first three-dimensional structure of a member of the mammalian trefoil family of peptides M Gajhede, TN Petersen, A Henriksen, JFW Petersen, Z Dauter, ... Structure 1 (4), 253-262, 1993 | 78 | 1993 |
| MGmapper: reference based mapping and taxonomy annotation of metagenomics sequence reads TN Petersen, O Lukjancenko, MCF Thomsen, M Maddalena Sperotto, ... PloS one 12 (5), e0176469, 2017 | 74 | 2017 |
| Midbrain expression of Delta-like 1 homologue is regulated by GDNF and is associated with dopaminergic differentiation NS Christophersen, M Grønborg, TN Petersen, L Fjord-Larsen, ... Experimental neurology 204 (2), 791-801, 2007 | 67 | 2007 |
| Norgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data K Al-Nakeeb, TN Petersen, T Sicheritz-Pontén BMC bioinformatics 18, 1-7, 2017 | 56 | 2017 |
| Cofactory: Sequence‐based prediction of cofactor specificity of Rossmann folds HM Geertz‐Hansen, N Blom, AM Feist, S Brunak, TN Petersen Proteins: Structure, Function, and Bioinformatics 82 (9), 1819-1828, 2014 | 47 | 2014 |
| Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets A Brinkmann, A Andrusch, A Belka, C Wylezich, D Höper, A Pohlmann, ... Journal of clinical microbiology 57 (8), e00466-19, 2019 | 34 | 2019 |
| Identification of novel genes regulated in the developing human ventral mesencephalon JR Jørgensen, B Juliusson, KF Henriksen, C Hansen, S Knudsen, ... Experimental neurology 198 (2), 427-437, 2006 | 26 | 2006 |
Søren BrunakProfessor of Disease Systems Biology, University of CopenhagenVerified email at cpr.ku.dk
