Ulf Leser

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Felix NaumannHasso Plattner Institute, University of PotsdamVerified email at hpi.de
Jörg HakenbergIllumina, Inc.Verified email at illumina.com
Philippe ThomasGerman Research Center for Artificial IntelligenceVerified email at dfki.de
Leon Weber-GenzelUniversity of MunichVerified email at cis.lmu.de
Patrick SchäferDepartment of Computer Science, Humboldt-University BerlinVerified email at hu-berlin.de
Johann-Christoph FreytagHumboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Johannes StarlingerComputer Science PostDoc, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Astrid RheinländerBayer AG, Pharmaceuticals R&D, Digital TechnologiesVerified email at bayer.com
Jannes MünchmeyerISTerre - Université Grenoble AlpesVerified email at univ-grenoble-alpes.fr
Mariana Lara NevesGerman Federal Institute for Risk AssessmentVerified email at bfr.bund.de
Maryam HabibiHumboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Marc BuxPhD student, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Sebastian WandeltBeihang UniversityVerified email at informatik.hu-berlin.de
Tim RocktäschelDirector and Open-Endedness Team Lead at Google DeepMind, Professor of AI at UCL, Fellow ELLISVerified email at cs.ucl.ac.uk
Domonkos TikkGravity R&D, a Taboola companyVerified email at taboola.com
Mario SängerNLP Researcher, Humboldt Universität zu BerlinVerified email at informatik.hu-berlin.de
Illés SoltVerified email at gravityrd.com
David Luis WiegandtStudent Research Assistant, Humboldt-Universität zu BerlinVerified email at informatik.hu-berlin.de
Odej KaoProfessor of Computer Science, TU BerlinVerified email at tu-berlin.de
Frederik TilmannDeutsches GeoForschungsZentrum (GFZ), PotsdamVerified email at gfz-potsdam.de

Ulf Leser

Knowledge Management in Bioinformatics, Humboldt-Universität zu Berlin

Verified email at informatik.hu-berlin.de - Homepage

databases Bioinformatics bionlp Scientific Workflows Data Integration


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Querying distributed RDF data sources with SPARQL B Quilitz, U Leser The Semantic Web: Research and Applications: 5th European Semantic Web …, 2008	761	2008
Deep learning with word embeddings improves biomedical named entity recognition M Habibi, L Weber, M Neves, DL Wiegandt, U Leser Bioinformatics 33 (14), i37-i48, 2017	668	2017
The stratosphere platform for big data analytics A Alexandrov, R Bergmann, S Ewen, JC Freytag, F Hueske, A Heise, ... The VLDB Journal 23, 939-964, 2014	668	2014
ChemSpot: a hybrid system for chemical named entity recognition T Rocktäschel, M Weidlich, U Leser Bioinformatics 28 (12), 1633-1640, 2012	351	2012
Quality-driven integration of heterogeneous information systems F Naumann, U Leser, JC Freytag Int. Conf. on Very Large Databases (VLDB), Edinburgh, UK, 1999	338*	1999
Fast and practical indexing and querying of very large graphs S Trißl, U Leser Proceedings of the 2007 ACM SIGMOD international conference on Management of …, 2007	330	2007
Fast and Accurate Time Series Classification with WEASEL P Schäfer, U Leser Int. Conf. on Information and Knowledge Management (CIKM), 2017	301	2017
Federated information systems: Concepts, terminology and architectures S Busse, RD Kutsche, U Leser, H Weber Forschungsberichte des Fachbereichs Informatik 99 (9), 1-38, 1999	275	1999
What makes a gene name? Named entity recognition in the biomedical literature U Leser, J Hakenberg Briefings in bioinformatics 6 (4), 357-369, 2005	251	2005
Informationsintegration: Architekturen und Methoden zur Integration verteilter und heterogener Datenquellen U Leser, F Naumann dpunkt. verlag, 2006	237*	2006
A comprehensive benchmark of kernel methods to extract protein–protein interactions from literature D Tikk, P Thomas, P Palaga, J Hakenberg, U Leser PLoS computational biology 6 (7), e1000837, 2010	227	2010
Multivariate time series classification with WEASEL+ MUSE P Schäfer, U Leser arXiv preprint arXiv:1711.11343, 2017	211	2017
Completeness of integrated information sources F Naumann, JC Freytag, U Leser Information Systems 29 (7), 583-615, 2004	205	2004
AliBaba: PubMed as a graph C Plake, T Schiemann, M Pankalla, J Hakenberg, U Leser Bioinformatics 22 (19), 2444-2445, 2006	202	2006
Ras-mediated deregulation of the circadian clock in cancer A Relogio, P Thomas, P Medina-Perez, S Reischl, S Bervoets, E Gloc, ... PLoS genetics 10 (5), e1004338, 2014	190	2014
A query language for biological networks U Leser Bioinformatics 21 (suppl_2), ii33-ii39, 2005	139	2005
A flexible framework for integrating annotations from different tools and tag sets C Chiarcos, S Dipper, M Götze, U Leser, A Lüdeling, J Ritz, M Stede Traitement Automatique des Langues, Volume 49, Numéro 2: Plate-formes pour …, 2008	133	2008
DynamicCloudSim: Simulating heterogeneity in computational clouds M Bux, U Leser Proceedings of the 2nd acm sigmod workshop on scalable workflow execution …, 2013	118	2013
NLProlog: Reasoning with Weak Unification for Question Answering in Natural Language L Weber, P Minervini, J Münchmeyer, U Leser, T Rocktäschel ACL, Florence, Italy, 2019	115	2019
A hierarchical approach to model web query interfaces for web source integration EC Dragut, T Kabisch, C Yu, U Leser Proceedings of the VLDB Endowment 2 (1), 325-336, 2009	113	2009

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