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Antarip Halder
Antarip Halder
Scientist, Aganitha Cognitive Solutions
Bestätigte E-Mail-Adresse bei aganitha.ai - Startseite
Titel
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Zitiert von
Jahr
Feasibility of occurrence of different types of protonated base pairs in RNA: a quantum chemical study
A Halder, S Halder, D Bhattacharyya, A Mitra
Physical Chemistry Chemical Physics 16 (34), 18383-18396, 2014
402014
The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs
A Halder, S Bhattacharya, A Datta, D Bhattacharyya, A Mitra
Physical Chemistry Chemical Physics 17 (39), 26249-26263, 2015
342015
Estimating strengths of individual hydrogen bonds in RNA base pairs: toward a consensus between different computational approaches
A Halder, D Data, PP Seelam, D Bhattacharyya, A Mitra
ACS omega 4 (4), 7354-7368, 2019
232019
RNABP COGEST: a resource for investigating functional RNAs
S Bhattacharya, S Mittal, S Panigrahi, P Sharma, P SP, R Paul, S Halder, ...
Database 2015, bav011, 2015
192015
Why does substitution of thymine by 6-ethynylpyridone increase the thermostability of DNA double helices?
A Halder, A Datta, D Bhattacharyya, A Mitra
The Journal of Physical Chemistry B 118 (24), 6586-6596, 2014
192014
Role of guanidinium-carboxylate ion interaction in enzyme inhibition with implications for drug design
AN Muttathukattil, S Srinivasan, A Halder, G Reddy
The Journal of Physical Chemistry B 123 (44), 9302-9311, 2019
172019
Consequences of Mg 2+ binding on the geometry and stability of RNA base pairs
A Halder, R Roy, D Bhattacharyya, A Mitra
Physical Chemistry Chemical Physics 20 (34), 21934-21948, 2018
172018
On the nature of nucleobase stacking in RNA: a comprehensive survey of its structural variability and a systematic classification of associated interactions
A Jhunjhunwala, Z Ali, S Bhattacharya, A Halder, A Mitra, P Sharma
Journal of Chemical Information and Modeling 61 (3), 1470-1480, 2021
162021
Going beyond base-pairs: topology-based characterization of base-multiplets in RNA
S Bhattacharya, A Jhunjhunwala, A Halder, D Bhattacharyya, A Mitra
RNA 25 (5), 573-589, 2019
142019
How does mg2+ modulate the rna folding mechanism: A case study of the g: Cw: W trans basepair
A Halder, R Roy, D Bhattacharyya, A Mitra
Biophysical journal 113 (2), 277-289, 2017
112017
Mg2+ Sensing by an RNA Fragment: Role of Mg2+-Coordinated Water Molecules
A Halder, S Kumar, O Valsson, G Reddy
Journal of Chemical Theory and Computation 16 (10), 6702-6715, 2020
102020
Evidence for hidden involvement of N3-protonated guanine in RNA structure and function
A Halder, S Vemuri, R Roy, J Katuri, D Bhattacharyya, A Mitra
ACS omega 4 (1), 699-709, 2019
92019
Reverse Watson-Crick purine-purine base pairs—The Sharp-turn motif and other structural consequences in functional RNAs
A Mittal, A Halder, S Bhattacharya, D Bhattacharyya, A Mitra
bioRxiv, 098723, 2017
32017
Dopant induced modulation in the structure and electronic properties of Au 10 cluster
LS Sidhu, A Halder, S Rai
RSC advances 6 (90), 87115-87123, 2016
32016
A comprehensive survey on the nature of ring: ring nucleobase stacking interactions in RNA: occurrence, structural variability and classification of the associated contacts
A Jhunjhunwala, Z Ali, S Bhattacharya, A Halder, A Mitra, P Sharma
bioRxiv, 2020.02. 28.970798, 2020
12020
NextGen Voices: Quality mentoring
L Segal, D Agarwal, KJ Isaacson, TB Oehmke, B Kumar, JS Chen, ...
Science 362 (6410), 22-24, 2018
12018
Geometry, Energetics and Properties of Protonated and Deprotonated RNA Bases
A Halder
Centre for Computational Natural Sciences and Bioinformatics International …, 2013
12013
Local RNA Structure, Ion Hydration Shell and the Energy Barrier for Water Exchange from the Ion Hydration Shell Determine the Mechanism of Ion Condensation on Specific RNA Sites
A Halder, S Kumar, S Habibullah, G Reddy
bioRxiv, 2022.08. 15.503937, 2022
2022
Occurrences of protonated base triples in RNA are determined by their cooperative binding energies and specific functional requirements
A Halder, A Jhunjhunwala, D Bhattacharyya, A Mitra
bioRxiv, 2021.01. 10.426061, 2021
2021
Seeking career clarity
N Van Rhijn, C Antoniou, K Burnette, A Christensen-Quick, M Lewinska, ...
Science 368 (6486), 26-28, 2020
2020
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