Marc Hoeppner
Marc Hoeppner
Head of bioinformatics, Department of Clinical Molecular Biology, Kiel University
Verified email at ikmb.uni-kiel.de - Homepage
Title
Cited by
Cited by
Year
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ...
Nature 492 (7427), 59-65, 2012
3402012
Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
S Lamichhaney, G Fan, F Widemo, U Gunnarsson, DS Thalmann, ...
Nature genetics 48 (1), 84-88, 2016
2522016
Specificity of the innate immune system and diversity of C-type lectin domain (CTLD) proteins in the nematode Caenorhabditis elegans
H Schulenburg, MP Hoeppner, J Weiner III, E Bornberg-Bauer
Immunobiology 213 (3-4), 237-250, 2008
1892008
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts
MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ...
PloS one 9 (3), e91172, 2014
1822014
Opportunities and challenges of whole-genome and-exome sequencing
BS Petersen, B Fredrich, MP Hoeppner, D Ellinghaus, A Franke
BMC genetics 18 (1), 1-13, 2017
1222017
The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
AM Barrio, S Lamichhaney, G Fan, N Rafati, M Pettersson, HE Zhang, ...
elife 5, e12081, 2016
1202016
A comprehensive, cell specific microRNA catalogue of human peripheral blood
S Juzenas, G Venkatesh, M Hübenthal, MP Hoeppner, ZG Du, M Paulsen, ...
Nucleic acids research 45 (16), 9290-9301, 2017
1022017
Transcriptomics of colour patterning and coloration shifts in crows
JW Poelstra, N Vijay, MP Hoeppner, JBW Wolf
Molecular ecology 24 (18), 4617-4628, 2015
642015
Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
P Rausch, M Rühlemann, BM Hermes, S Doms, T Dagan, K Dierking, ...
Microbiome 7 (1), 1-19, 2019
622019
Coordinated Changes in Gene Expression Throughout Encystation of Giardia intestinalis
E Einarsson, K Troell, MP Hoeppner, M Grabherr, U Ribacke, SG Svärd
PLoS neglected tropical diseases 10 (3), e0004571, 2016
622016
Unsupervised genome-wide recognition of local relationship patterns
N Zamani, P Russell, H Lantz, MP Hoeppner, JRS Meadows, N Vijay, ...
BMC genomics 14 (1), 1-11, 2013
552013
Evolutionarily stable association of intronic snoRNAs and microRNAs with their host genes
MP Hoeppner, S White, DC Jeffares, AM Poole
Genome biology and evolution 1, 420-428, 2009
522009
Comparative analysis of RNA families reveals distinct repertoires for each domain of life
MP Hoeppner, PP Gardner, AM Poole
PLoS Comput Biol 8 (11), e1002752, 2012
492012
An overview of the introns-first theory
D Penny, MP Hoeppner, AM Poole, DC Jeffares
Journal of molecular evolution 69 (5), 527-540, 2009
482009
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, Q Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
372020
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen
YC Lin, J Wang, N Delhomme, B Schiffthaler, G Sundström, A Zuccolo, ...
Proceedings of the National Academy of Sciences 115 (46), E10970-E10978, 2018
362018
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
JP Bernardes, N Mishra, F Tran, T Bahmer, L Best, JI Blase, D Bordoni, ...
Immunity 53 (6), 1296-1314. e9, 2020
332020
Rates of Mutation and Recombination in Siphoviridae Phage Genome Evolution over Three Decades
A Kupczok, H Neve, KD Huang, MP Hoeppner, KJ Heller, CMAP Franz, ...
Molecular biology and evolution 35 (5), 1147-1159, 2018
282018
Comparative genomics of eukaryotic small nucleolar RNAs reveals deep evolutionary ancestry amidst ongoing intragenomic mobility
MP Hoeppner, AM Poole
BMC evolutionary biology 12 (1), 1-19, 2012
272012
Reference genomes from distantly related species can be used for discovery of single nucleotide polymorphisms to inform conservation management
SJ Galla, NJ Forsdick, L Brown, MP Hoeppner, M Knapp, RF Maloney, ...
Genes 10 (1), 9, 2019
262019
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