The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Čech, ... Nucleic acids research 44 (W1), W3-W10, 2016 | 2428 | 2016 |
Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 316 | 2018 |
Dissemination of scientific software with Galaxy ToolShed D Blankenberg, G Von Kuster, E Bouvier, D Baker, E Afgan, N Stoler, ... Genome biology 15 (2), 1-3, 2014 | 174 | 2014 |
StructureFold: genome-wide RNA secondary structure mapping and reconstruction in vivo Y Tang, E Bouvier, CK Kwok, Y Ding, A Nekrutenko, PC Bevilacqua, ... Bioinformatics 31 (16), 2668-2675, 2015 | 46 | 2015 |
HyPhy 2.5—A Customizable Platform for Evolutionary Hypothesis Testing Using Phylogenies SL Kosakovsky Pond, AFY Poon, R Velazquez, S Weaver, NL Hepler, ... Molecular biology and evolution 37 (1), 295-299, 2020 | 37 | 2020 |
No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics D Baker, M Van Den Beek, D Blankenberg, D Bouvier, J Chilton, N Coraor, ... PLoS pathogens 16 (8), e1008643, 2020 | 4* | 2020 |
Expanding the Galaxy’s reference data N VijayKrishna, J Joshi, N Coraor, J Hillman-Jackson, D Bouvier, ... bioRxiv, 2020 | | 2020 |