A survey of best practices for RNA-seq data analysis A Conesa, P Madrigal, S Tarazona, D Gomez-Cabrero, A Cervera, ... Genome biology 17, 1-19, 2016 | 2977 | 2016 |
Modified penetrance of coding variants by cis-regulatory variation contributes to disease risk SE Castel, A Cervera, P Mohammadi, F Aguet, F Reverter, A Wolman, ... Nature genetics 50 (9), 1327-1334, 2018 | 197 | 2018 |
Gene expression profiling of pre-eclamptic placentae by RNA sequencing T Kaartokallio, A Cervera, A Kyllönen, K Laivuori, J Kere, H Laivuori Scientific reports 5 (1), 1-16, 2015 | 86 | 2015 |
SePIA: RNA and small RNA sequence processing, integration, and analysis K Icay, P Chen, A Cervera, V Rantanen, R Lehtonen, S Hautaniemi BioData mining 9, 1-18, 2016 | 40 | 2016 |
Anduril 2: upgraded large-scale data integration framework A Cervera, V Rantanen, K Ovaska, M Laakso, J Nuñez-Fontarnau, ... Bioinformatics 35 (19), 3815-3817, 2019 | 33 | 2019 |
MicroRNAs regulate key cell survival pathways and mediate chemosensitivity during progression of diffuse large B-cell lymphoma SK Leivonen, K Icay, K Jäntti, I Siren, C Liu, A Alkodsi, A Cervera, ... Blood cancer journal 7 (12), 654, 2017 | 30 | 2017 |
Distinct subtypes of diffuse large B-cell lymphoma defined by hypermutated genes A Alkodsi, A Cervera, K Zhang, R Louhimo, L Meriranta, A Pasanen, ... Leukemia 33 (11), 2662-2672, 2019 | 29 | 2019 |
Alternative splicing discriminates molecular subtypes and has prognostic impact in diffuse large B-cell lymphoma SK Leivonen, M Taskinen, A Cervera, ML Karjalainen-Lindsberg, ... Blood cancer journal 7 (8), e596-e596, 2017 | 24 | 2017 |
Deltex-1 mutations predict poor survival in diffuse large B-cell lymphoma L Meriranta, A Pasanen, R Louhimo, A Cervera, A Alkodsi, M Autio, ... haematologica 102 (5), e195, 2017 | 23 | 2017 |
Integrative analysis of deep sequencing data identifies estrogen receptor early response genes and links ATAD3B to poor survival in breast cancer K Ovaska, F Matarese, K Grote, I Charapitsa, A Cervera, C Liu, G Reid, ... PLoS Comput Biol 9 (6), e1003100, 2013 | 17 | 2013 |
Functional profiling of FSH and estradiol in ovarian granulosa cell tumors UM Haltia, M Pihlajoki, N Andersson, L Mäkinen, J Tapper, A Cervera, ... Journal of the Endocrine Society 4 (4), bvaa034, 2020 | 16 | 2020 |
Anagrelide for gastrointestinal stromal tumor OP Pulkka, YK Gebreyohannes, A Wozniak, JP Mpindi, O Tynninen, ... Clinical Cancer Research 25 (5), 1676-1687, 2019 | 16 | 2019 |
Human cell transformation by combined lineage conversion and oncogene expression B Sahu, P Pihlajamaa, K Zhang, K Palin, S Ahonen, A Cervera, ... Oncogene, 1-15, 2021 | 14* | 2021 |
Authorship attribution as a case of anomaly detection: A neural network model A Neme, B Lugo, A Cervera International Journal of Hybrid Intelligent Systems 8 (4), 225-235, 2011 | 14 | 2011 |
Genomic Profile in a Non-Seminoma Testicular Germ-Cell Tumor Cohort Reveals a Potential Biomarker of Sensitivity to Platinum-Based Therapy R González-Barrios, N Alcaraz, M Montalvo-Casimiro, A Cervera, ... Cancers 14 (9), 2065, 2022 | 5 | 2022 |
Detection of different authorship of text sequences through self-organizing maps and mutual information function A Neme, B Lugo, A Cervera Mexican International Conference on Artificial Intelligence, 186-195, 2010 | 4 | 2010 |
Decreasing Neighborhood Revisited in Self-Organizing Maps A Neme, E Chavez, A Cervera, V Mireles International Conference on Artificial Neural Networks, 671-679, 2008 | 3 | 2008 |
FUNGI: FUsioN Gene Integration toolset A Cervera, H Rausio, T Kähkönen, N Andersson, G Partel, V Rantanen, ... Bioinformatics 37 (19), 3353-3355, 2021 | 1 | 2021 |
Global Profiling Of Outcome Associated Alternative Splicing Events and Gene Expression In Diffuse Large B-Cell Lymphoma P Chen, ML Karjalainen-Lindsberg, A Cervera, J Delabie, H Holte, ... Blood 122 (21), 75-75, 2013 | 1 | 2013 |
PIK3R1 fusion drives chemoresistance in ovarian cancer by activating ERK1/2 and inducing rod and ring-like structures H Rausio, A Cervera, VD Heuser, G West, J Oikkonen, E Pianfetti, ... Neoplasia 51, 100987, 2024 | | 2024 |