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Daniele Silvestro
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raxmlGUI: a graphical front-end for RAxML
D Silvestro, I Michalak
Organisms Diversity & Evolution 12 (4), 335-337, 2012
29282012
Biological evidence supports an early and complex emergence of the Isthmus of Panama
CD Bacon, D Silvestro, C Jaramillo, BT Smith, P Chakrabarty, A Antonelli
Proceedings of the National Academy of Sciences 112 (19), 6110-6115, 2015
4882015
Amazonia is the primary source of Neotropical biodiversity
A Antonelli, A Zizka, FA Carvalho, R Scharn, CD Bacon, D Silvestro, ...
Proceedings of the National Academy of Sciences 115 (23), 6034-6039, 2018
2902018
CoordinateCleaner: standardized cleaning of occurrence records from biological collection databases
A Zizka, D Silvestro, T Andermann, J Azevedo, C Duarte Ritter, D Edler, ...
Methods in Ecology and Evolution, 2019
2092019
raxmlGUI 2.0: A graphical interface and toolkit for phylogenetic analyses using RAxML
D Edler, J Klein, A Antonelli, D Silvestro
Methods in Ecology and Evolution 12 (2), 373-377, 2021
2032021
Recent origin and rapid speciation of Neotropical orchids in the world's richest plant biodiversity hotspot
OA Pérez‐Escobar, G Chomicki, FL Condamine, AP Karremans, ...
New Phytologist 215 (2), 891-905, 2017
1472017
Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae)
D Silvestro, G Zizka, K Schulte
Evolution 68 (1), 163-175, 2014
1472014
Bayesian estimation of speciation and extinction from incomplete fossil occurrence data
D Silvestro, J Schnitzler, LH Liow, A Antonelli, N Salamin
Systematic biology 63 (3), 349-367, 2014
1462014
The role of clade competition in the diversification of North American canids
D Silvestro, A Antonelli, N Salamin, TB Quental
Proceedings of the National Academy of Sciences 112 (28), 8684-8689, 2015
1302015
Revisiting the origin and diversification of vascular plants through a comprehensive Bayesian analysis of the fossil record
D Silvestro, B Cascales-Miñana, CD Bacon, A Antonelli
New Phytologist, 2015
1132015
Conceptual and empirical advances in Neotropical biodiversity research
A Antonelli, M Ariza, J Albert, T Andermann, J Azevedo, C Bacon, ...
PeerJ 6, e5644, 2018
1042018
The Pliocene marine megafauna extinction and its impact on functional diversity
C Pimiento, JN Griffin, CF Clements, D Silvestro, S Varela, MD Uhen, ...
Nature ecology & evolution 1 (8), 1100-1106, 2017
962017
A Bayesian framework to estimate diversification rates and their variation through time and space
D Silvestro, J Schnitzler, G Zizka
BMC evolutionary biology 11 (1), 1-15, 2011
952011
PyRate: a new program to estimate speciation and extinction rates from incomplete fossil data
D Silvestro, N Salamin, J Schnitzler
Methods in Ecology and Evolution 5 (10), 1126-1131, 2014
922014
Comment (1) on “Formation of the Isthmus of Panama” by O’Dea et al.
C Jaramillo, C Montes, A Cardona, D Silvestro, A Antonelli, CD Bacon
Science Advances 3 (6), e1602321, 2017
812017
An engine for global plant diversity: highest evolutionary turnover and emigration in the American tropics
A Antonelli, A Zizka, D Silvestro, R Scharn, B Cascales-Miñana, ...
Frontiers in Genetics 6, 130, 2015
812015
Measurement errors should always be incorporated in phylogenetic comparative analysis
D Silvestro, A Kostikova, G Litsios, PB Pearman, N Salamin
Methods in Ecology and Evolution 6 (3), 340-346, 2015
782015
Environmentally driven extinction and opportunistic origination explain fern diversification patterns
S Lehtonen, D Silvestro, DN Karger, C Scotese, H Tuomisto, M Kessler, ...
Scientific reports 7 (1), 1-12, 2017
742017
SpeciesGeoCoder: fast categorization of species occurrences for analyses of biodiversity, biogeography, ecology, and evolution
M Töpel, A Zizka, MF Calió, R Scharn, D Silvestro, A Antonelli
Systematic Biology 66 (2), 145-151, 2017
732017
Functional diversity of marine megafauna in the Anthropocene
C Pimiento, F Leprieur, D Silvestro, JS Lefcheck, C Albouy, DB Rasher, ...
Science Advances 6 (16), eaay7650, 2020
692020
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