Arang Rhie
Arang Rhie
Staff Scientist, NHGRI, NIH
Verified email at
Cited by
Cited by
Nanopore sequencing and assembly of a human genome with ultra-long reads
M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ...
Nature biotechnology 36 (4), 338-345, 2018
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
Telomere-to-telomere assembly of a complete human X chromosome
KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ...
Nature 585 (7823), 79-84, 2020
Towards complete and error-free genome assemblies of all vertebrate species
A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ...
Nature 592 (7856), 737-746, 2021
Integrating Hi-C links with assembly graphs for chromosome-scale assembly
SK Jay Ghurye, Arang Rhie, Brian P. Walenz, Anthony Schmitt, Siddarth ...
PLOS Computational Biology, 2019
De novo assembly and phasing of a Korean human genome
JS Seo, A Rhie, J Kim, S Lee, MH Sohn, CU Kim, A Hastie, H Cao, JY Yun, ...
Nature 538 (7624), 243-247, 2016
HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
S Nurk, BP Walenz, A Rhie, MR Vollger, GA Logsdon, R Grothe, KH Miga, ...
Genome research 30 (9), 1291-1305, 2020
De novo assembly of haplotype-resolved genomes with trio binning
S Koren, A Rhie, BP Walenz, AT Dilthey, DM Bickhart, SB Kingan, ...
Nature biotechnology 36 (12), 1174-1182, 2018
De novo assembly of the cattle reference genome with single-molecule sequencing
BD Rosen, DM Bickhart, RD Schnabel, S Koren, CG Elsik, E Tseng, ...
Gigascience 9 (3), giaa021, 2020
Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies
A Rhie, B P. Walenz, S Koren, A M. Phillippy
Genome Biology 21 (245), 2020
The structure, function, and evolution of a complete human chromosome 8
E Eichler, G Logsdon, M Vollger, PH Hsieh, Y Mao, M Liskovykh, S Koren, ...
Nature 593, 101–107, 2021
Weighted minimizer sampling improves long read mapping
C Jain, A Rhie, H Zhang, C Chu, BP Walenz, S Koren, AM Phillippy
Bioinformatics 36 (Supplement_1), i111-i118, 2020
Complete genomic and epigenetic maps of human centromeres
N Altemose, GA Logsdon, AV Bzikadze, P Sidhwani, SA Langley, ...
Science 376 (6588), eabl4178, 2022
FX: an RNA-Seq analysis tool on the cloud
D Hong, A Rhie, SS Park, J Lee, YS Ju, S Kim, SB Yu, T Bleazard, ...
Bioinformatics 28 (5), 721-723, 2012
A complete reference genome improves analysis of human genetic variation
S Aganezov, SM Yan, DC Soto, M Kirsche, S Zarate, P Avdeyev, ...
Science 376 (6588), eabl3533, 2022
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C
ZN Kronenberg, A Rhie, S Koren, GT Concepcion, P Peluso, KM Munson, ...
Nature communications 12 (1), 1935, 2021
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
WY Low, R Tearle, R Liu, S Koren, A Rhie, DM Bickhart, BD Rosen, ...
Nature Communications 11 (1), 2071, 2020
Platypus and echidna genomes reveal mammalian biology and evolution
Y Zhou, L Shearwin-Whyatt, J Li, Z Song, T Hayakawa, D Stevens, ...
Nature, 1-7, 2021
Epigenetic patterns in a complete human genome
A Gershman, MEG Sauria, X Guitart, MR Vollger, PW Hook, SJ Hoyt, ...
Science 376 (6588), eabj5089, 2022
HLA* LA—HLA typing from linearly projected graph alignments
AT Dilthey, AJ Mentzer, R Carapito, C Cutland, N Cereb, SA Madhi, ...
Bioinformatics 35 (21), 4394-4396, 2019
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