| Brain cell type–specific enhancer–promoter interactome maps and disease-risk association A Nott, IR Holtman, NG Coufal, JCM Schlachetzki, M Yu, R Hu, CZ Han, ... Science 366 (6469), 1134-1139, 2019 | 530 | 2019 |
| Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages GJ Fonseca, J Tao, EM Westin, SH Duttke, NJ Spann, T Strid, Z Shen, ... Nature communications 10 (1), 414, 2019 | 60 | 2019 |
| Mechanisms underlying divergent responses of genetically distinct macrophages to IL-4 MA Hoeksema*, Z Shen*, IR Holtman, A Zheng, NJ Spann, I Cobo, ... Science advances 7 (25), eabf9808, 2021 | 33 | 2021 |
| The epigenetic state of IL-4-polarized macrophages enables inflammatory cistromic expansion and extended synergistic response to TLR ligands Z Czimmerer, L Halasz, B Daniel, Z Varga, K Bene, A Domokos, ... Immunity 55 (11), 2006-2026. e6, 2022 | 21 | 2022 |
| MAGGIE: leveraging genetic variation to identify DNA sequence motifs mediating transcription factor binding and function Z Shen, M Hoeksema, Z Ouyang, C Benner, CK Glass Bioinformatics 36, i84–i92, 2020 | 13 | 2020 |
| SALL1 enforces microglia-specific DNA binding and function of SMADs to establish microglia identity BR Fixsen, CZ Han, Y Zhou, NJ Spann, P Saisan, Z Shen, C Balak, ... Nature immunology 24 (7), 1188-1199, 2023 | 8 | 2023 |
| Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs Z Shen, RZ Li, TA Prohaska, MA Hoeksema, NJ Spann, J Tao, ... Elife 11, e70878, 2022 | 6 | 2022 |
| False dyssynchrony: problem with image-based cardiac functional analysis using x-ray computed tomography M Kidoh, Z Shen, Y Suzuki, L Ciuffo, H Ashikaga, GSK Fung, Y Otake, ... Medical Imaging 2017: Physics of Medical Imaging 10132, 449-455, 2017 | 6 | 2017 |
| Elucidating the CodY regulon in Staphylococcus aureus USA300 substrains TCH1516 and LAC Y Gao, S Poudel, Y Seif, Z Shen, BO Palsson Msystems, e00279-23, 2023 | 4* | 2023 |
| Projection-based motion estimation for cardiac functional analysis with high temporal resolution: a proof-of-concept study with digital phantom experiment Y Suzuki, GSK Fung, Z Shen, Y Otake, O Lee, L Ciuffo, H Ashikaga, ... Medical Imaging 2017: Physics of Medical Imaging 10132, 778-781, 2017 | 3 | 2017 |
| Beam hardening and motion artifacts in cardiac CT: evaluation and iterative correction method Z Shen, O Lee, K Taguchi Medical Imaging 2016: Physics of Medical Imaging 9783, 814-822, 2016 | 3 | 2016 |
| The nuclear factor ID3 endows macrophages with a potent anti-tumour activity Z Deng, PL Loyher, T Lazarov, L Li, Z Shen, B Bhinder, H Yang, Y Zhong, ... Nature, 1-10, 2024 | 2 | 2024 |
| A genome catalog of the early-life human skin microbiome Z Shen, L Robert, M Stolpman, Y Che, KJ Allen, R Saffery, A Walsh, ... Genome Biology 24 (1), 252, 2023 | 2 | 2023 |
| The TBK1/IKKε inhibitor amlexanox improves dyslipidemia and prevents atherosclerosis P Zhao, X Sun, Z Liao, H Yu, D Li, Z Shen, CK Glass, JL Witztum, ... JCI insight 7 (17), 2022 | 2 | 2022 |
| A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation Y Abe, ER Kofman, Z Ouyang, G Cruz-Becerra, NJ Spann, JS Seidman, ... Proceedings of the National Academy of Sciences 121 (2), e2316104121, 2024 | 1 | 2024 |
| Expanded microbiome niches of RAG-deficient patients RA Blaustein, Z Shen, SS Kashaf, SQ Lee-Lin, S Conlan, J Thomas, ... Cell Reports Medicine 4 (10), 2023 | | 2023 |
| Deep learning predicts the impact of regulatory variants on cell-type specific enhancers in the brain A Zheng*, Z Shen*, CK Glass, M Gymrek Bioinformatics Advances, 2023 | | 2023 |
| Investigating the Effects of Genetic Variation on Transcriptional Regulation Z Shen University of California, San Diego, 2021 | | 2021 |
glass ckProfessor Cellular and Molecular Medicine UC San DiegoBestätigte E-Mail-Adresse bei ucsd.edu
