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Annalisa Marsico
Annalisa Marsico
Helmholtz Munich
Bestätigte E-Mail-Adresse bei helmholtz-muenchen.de - Startseite
Titel
Zitiert von
Zitiert von
Jahr
PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs
A Marsico, MR Huska, J Lasserre, H Hu, D Vucicevic, A Musahl, UA Orom, ...
Genome biology 14, 1-23, 2013
1292013
PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data
S Krakau, H Richard, A Marsico
Genome biology 18, 1-17, 2017
802017
Microprocessor activity controls differential miRNA biogenesis in vivo
T Conrad, A Marsico, M Gehre, UA Ørom
Cell reports 9 (2), 542-554, 2014
792014
Microprocessor activity controls differential miRNA biogenesis in vivo
T Conrad, A Marsico, M Gehre, UA Ørom
Cell reports 9 (2), 542-554, 2014
792014
Pysster: classification of biological sequences by learning sequence and structure motifs with convolutional neural networks
S Budach, A Marsico
Bioinformatics 34 (17), 3035-3037, 2018
742018
A long non-coding RNA links calreticulin-mediated immunogenic cell removal to RB1 transcription
AS Musahl, X Huang, S Rusakiewicz, E Ntini, A Marsico, G Kroemer, ...
Oncogene 34 (39), 5046-5054, 2015
462015
A novel pattern recognition algorithm to classify membrane protein unfolding pathways with high-throughput single-molecule force spectroscopy
A Marsico, D Labudde, T Sapra, DJ Muller, M Schroeder
Bioinformatics 23 (2), e231-e236, 2007
442007
ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data
D Heller, R Krestel, U Ohler, M Vingron, A Marsico
Nucleic acids research, 2017
392017
Integration of multiomics data with graph convolutional networks to identify new cancer genes and their associated molecular mechanisms
R Schulte-Sasse, S Budach, D Hnisz, A Marsico
Nature Machine Intelligence 3 (6), 513-526, 2021
382021
TriPepSVM: de novo prediction of RNA-binding proteins based on short amino acid motifs
A Bressin, R Schulte-Sasse, D Figini, EC Urdaneta, BM Beckmann, ...
Nucleic acids research 47 (9), 4406-4417, 2019
352019
Kinetics of Xist-induced gene silencing can be predicted from combinations of epigenetic and genomic features
LBA e Sousa, I Jonkers, L Syx, I Dunkel, J Chaumeil, C Picard, B Foret, ...
Genome research 29 (7), 1087-1099, 2019
312019
Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin
E Ntini, A Louloupi, J Liz, JM Muino, A Marsico, UAV Ørom
Nature communications 9 (1), 1636, 2018
302018
Identification of 170 new long noncoding RNAs in Schistosoma mansoni
VF Oliveira, LAG Moares, EA Mota, LK Jannotti-Passos, PMZ Coelho, ...
BioMed research international 2018, 2018
242018
MeMotif: a database of linear motifs in α-helical transmembrane proteins
A Marsico, K Scheubert, A Tuukkanen, A Henschel, C Winter, ...
Nucleic acids research 38 (suppl_1), D181-D189, 2010
232010
Graph convolutional networks improve the prediction of cancer driver genes
R Schulte-Sasse, S Budach, D Hnisz, A Marsico
Artificial Neural Networks and Machine Learning–ICANN 2019: Workshop and …, 2019
192019
Effect of atmospheric aging on soot particle toxicity in lung cell models at the air–liquid interface: differential toxicological impacts of biogenic and anthropogenic …
S Offer, E Hartner, S Di Bucchianico, C Bisig, S Bauer, J Pantzke, ...
Environmental health perspectives 130 (2), 027003, 2022
182022
Principles of microRNA regulation revealed through modeling microRNA expression quantitative trait loci
S Budach, M Heinig, A Marsico
Genetics 203 (4), 1629-1640, 2016
182016
Genome-wide Chromatin Profiling of Legionella pneumophila–Infected Human Macrophages Reveals Activation of the Probacterial Host Factor TNFAIP2
I Du Bois, A Marsico, W Bertrams, MR Schweiger, BE Caffrey, ...
The Journal of infectious diseases 214 (3), 454-463, 2016
162016
Functional impacts of non-coding RNA processing on enhancer activity and target gene expression
E Ntini, A Marsico
Journal of molecular cell biology 11 (10), 868-879, 2019
142019
Structural fragment clustering reveals novel structural and functional motifs in α-helical transmembrane proteins
A Marsico, A Henschel, C Winter, A Tuukkanen, B Vassilev, K Scheubert, ...
BMC bioinformatics 11 (1), 1-20, 2010
142010
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