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Guangjie (Jerry) Shi
Guangjie (Jerry) Shi
Verified email at physast.uga.edu
Title
Cited by
Cited by
Year
Effect of single-site mutations on hydrophobic-polar lattice proteins
G Shi, T Vogel, T Wüst, YW Li, DP Landau
Physical Review E 90 (3), 033307, 2014
232014
Protein folding of the HOP model: a parallel Wang—Landau study
G Shi, T Wuest, YW Li, DP Landau
Journal of Physics: Conference Series 640 (1), 012017, 2015
122015
The role of chain-stiffness in lattice protein models: A replica-exchange Wang-Landau study
ACK Farris, G Shi, T Wüst, DP Landau
The Journal of Chemical Physics 149 (12), 125101, 2018
112018
Folding in a semi-flexible lattice model for Crambin
G Shi, ACK Farris, T Wüst, DP Landau
Journal of Physics: Conference Series 686 (1), 012001, 2016
82016
Characterizing folding funnels with replica exchange Wang-Landau simulation of lattice proteins
G Shi, T Wüst, DP Landau
Physical Review E 94 (5), 050402, 2016
72016
Task-based parallel computation of the density matrix in quantum-based molecular dynamics using graph partitioning
P Ghale, MP Kroonblawd, S Mniszewski, CFA Negre, R Pavel, S Pino, ...
SIAM Journal on Scientific Computing 39 (6), C466-C480, 2017
42017
Replica Exchange Wang—Landau Simulation of Lattice Protein Folding Funnels
G Shi, T Wüst, PL David
Journal of Physics: Conference Series 905 (1), 012016, 2017
32017
Effects of Stiffness on Low Energy States in a Lattice Protein Model for Crambin
ACK Farris, G Shi, T Wüst, DP Landau
Journal of Physics: Conference Series 1012 (1), 012008, 2018
12018
Crambin Homologues in the H0P Lattice Model
Z Zhang, ACK Farris, G Shi, T Wüst, DP Landau
Journal of Physics: Conference Series 1290 (1), 012018, 2019
2019
Elucidating thermal behavior, native contacts, and folding funnels of simple lattice proteins using replica exchange Wang-Landau sampling
G Shi, T Wüst, DP Landau
The Journal of Chemical Physics 149 (16), 164913, 2018
2018
Influence of substrate pattern on the adsorption of HP lattice proteins
MS Wilson, G Shi, T Wüst, YW Li, DP Landau
Molecular Simulation 44 (12), 1025-1030, 2018
2018
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Articles 1–11