| Detecting protein function and protein-protein interactions from genome sequences EM Marcotte, M Pellegrini, HL Ng, DW Rice, TO Yeates, D Eisenberg Science 285 (5428), 751-753, 1999 | 2196 | 1999 |
| DIP: the database of interacting proteins I Xenarios, DW Rice, L Salwinski, MK Baron, EM Marcotte, D Eisenberg Nucleic acids research 28 (1), 289-291, 2000 | 1233 | 2000 |
| The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ... Nature 452 (7190), 991-996, 2008 | 1187 | 2008 |
| Insights into the Evolution of Mitochondrial Genome Size from Complete Sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae) AJ Alverson, XX Wei, DW Rice, DB Stern, K Barry, JD Palmer Molecular biology and evolution 27 (6), 1436-1448, 2010 | 405 | 2010 |
| Horizontal transfer of entire genomes via mitochondrial fusion in the angiosperm Amborella DW Rice, AJ Alverson, AO Richardson, GJ Young, MV Sanchez-Puerta, ... Science 342 (6165), 1468-1473, 2013 | 318 | 2013 |
| Origins and recombination of the bacterial-sized multichromosomal mitochondrial genome of cucumber AJ Alverson, DW Rice, S Dickinson, K Barry, JD Palmer The Plant Cell 23 (7), 2499-2513, 2011 | 257 | 2011 |
| Genome-scale data, angiosperm relationships, and ‘ending incongruence’: a cautionary tale in phylogenetics DE Soltis, VA Albert, V Savolainen, K Hilu, YL Qiu, MW Chase, JS Farris, ... Trends in plant science 9 (10), 477-483, 2004 | 237 | 2004 |
| Localized hypermutation and associated gene losses in legume chloroplast genomes AM Magee, S Aspinall, DW Rice, BP Cusack, M Sémon, AS Perry, ... Genome research 20 (12), 1700-1710, 2010 | 223 | 2010 |
| A 3D-1D substitution matrix for protein fold recognition that includes predicted secondary structure of the sequence DW Rice, D Eisenberg Journal of molecular biology 267 (4), 1026-1038, 1997 | 221 | 1997 |
| Miniaturized mitogenome of the parasitic plant Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes E Skippington, TJ Barkman, DW Rice, JD Palmer Proceedings of the National Academy of Sciences 112 (27), E3515-E3524, 2015 | 205 | 2015 |
| Assessing the performance of fold recognition methods by means of a comprehensive benchmark D Fischer, A Elofsson, D Rice, D Eisenberg Pac Symp Biocomput 97, 300-318, 1996 | 194 | 1996 |
| An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters DW Rice, JD Palmer BMC biology 4 (1), 1-15, 2006 | 191 | 2006 |
| The “fossilized” mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate AO Richardson, DW Rice, GJ Young, AJ Alverson, JD Palmer BMC biology 11 (1), 1-17, 2013 | 185 | 2013 |
| Long branch attraction, taxon sampling, and the earliest angiosperms: Amborella or monocots? S Stefanović, DW Rice, JD Palmer BMC Evolutionary Biology 4, 1-19, 2004 | 177 | 2004 |
| The mitochondrial genome of the legume Vigna radiata and the analysis of recombination across short mitochondrial repeats AJ Alverson, S Zhuo, DW Rice, DB Sloan, JD Palmer PLoS one 6 (1), e16404, 2011 | 159 | 2011 |
| Evolutionary Genetics of Cytoplasmic Incompatibility Genes cifA and cifB in Prophage WO of Wolbachia ARI Lindsey, DW Rice, SR Bordenstein, AW Brooks, SR Bordenstein, ... Genome biology and evolution 10 (2), 434-451, 2018 | 137 | 2018 |
| Assigning amino acid sequences to 3‐dimensional protein folds D Fischer, D Rice, JU Bowie, D Eisenberg The FASEB journal 10 (1), 126-136, 1996 | 134 | 1996 |
| The 1.5-. ANG. crystal structure of plastocyanin from the green alga Chlamydomonas reinhardtii MR Redinbo, D Cascio, MK Choukair, D Rice, S Merchant, TO Yeates Biochemistry 32 (40), 10560-10567, 1993 | 134 | 1993 |
| Castor bean organelle genome sequencing and worldwide genetic diversity analysis M Rivarola, JT Foster, AP Chan, AL Williams, DW Rice, X Liu, ... PloS one 6 (7), e21743, 2011 | 103 | 2011 |
| A study of combined structure/sequence profiles A Elofsson, D Fischer, DW Rice, SM Le Grand, D Eisenberg Folding and Design 1 (6), 451-461, 1996 | 74 | 1996 |
