Sebastian Will
Sebastian Will
Researcher, Bioinformatics, TBI, University of Vienna
Verified email at tbi.univie.ac.at - Homepage
TitleCited byYear
Identification of functional elements and regulatory circuits by Drosophila modENCODE
S Roy, J Ernst, PV Kharchenko, P Kheradpour, N Negre, ML Eaton, ...
Science 330 (6012), 1787-1797, 2010
7242010
Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering
S Will, K Reiche, IL Hofacker, PF Stadler, R Backofen
PLoS computational biology 3 (4), e65, 2007
4252007
RNAalifold: improved consensus structure prediction for RNA alignments
SH Bernhart, IL Hofacker, S Will, AR Gruber, PF Stadler
BMC bioinformatics 9 (1), 474, 2008
4182008
Freiburg RNA Tools: a web server integrating IntaRNA, ExpaRNA and LocARNA
C Smith, S Heyne, AS Richter, S Will, R Backofen
Nucleic acids research 38 (suppl_2), W373-W377, 2010
1962010
LocARNA-P: accurate boundary prediction and improved detection of structural RNAs
S Will, T Joshi, IL Hofacker, PF Stadler, R Backofen
Rna 18 (5), 900-914, 2012
1742012
Excluding symmetries in constraint-based search
R Backofen, S Will
International Conference on Principles and Practice of Constraint …, 1999
1521999
A constraint-based approach to fast and exact structure prediction in three-dimensional protein models
R Backofen, S Will
Constraints 11 (1), 5-30, 2006
1182006
Variations on RNA folding and alignment: lessons from Benasque
AF Bompfünewerer, R Backofen, SH Bernhart, J Hertel, IL Hofacker, ...
Journal of mathematical biology 56 (1-2), 129-144, 2008
952008
CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systems
SJ Lange, OS Alkhnbashi, D Rose, S Will, R Backofen
Nucleic acids research 41 (17), 8034-8044, 2013
882013
RNAs everywhere: genome‐wide annotation of structured RNAs
R Backofen, SH Bernhart, C Flamm, C Fried, G Fritzsch, J Hackermüller, ...
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2007
852007
Application of constraint programming techniques for structure prediction of lattice proteins with extended alphabets.
R Backofen, S Will, E Bornberg-Bauer
Bioinformatics (Oxford, England) 15 (3), 234-242, 1999
771999
CPSP-tools–Exact and complete algorithms for high-throughput 3D lattice protein studies
M Mann, S Will, R Backofen
BMC bioinformatics 9 (1), 230, 2008
552008
Local sequence-structure motifs in RNA
R Backofen, S Will
Journal of bioinformatics and computational biology 2 (04), 681-698, 2004
542004
Algorithmic approach to quantifying the hydrophobic force contribution in protein folding
R Backofen, S Will, P Clote
Biocomputing 2000, 95-106, 1999
471999
Time and space efficient RNA-RNA interaction prediction via sparse folding
R Salari, M Möhl, S Will, SC Sahinalp, R Backofen
Annual International Conference on Research in Computational Molecular …, 2010
442010
Computational analysis of noncoding RNAs
S Washietl, S Will, DA Hendrix, LA Goff, JL Rinn, B Berger, M Kellis
Wiley Interdisciplinary Reviews: RNA 3 (6), 759-778, 2012
432012
Excluding symmetries in constraint-based search
R Backofen, S Will
Constraints 7 (3-4), 333-349, 2002
422002
Structure-based whole-genome realignment reveals many novel noncoding RNAs
S Will, M Yu, B Berger
Genome research 23 (6), 1018-1027, 2013
352013
Structator: fast index-based search for RNA sequence-structure patterns
F Meyer, S Kurtz, R Backofen, S Will, M Beckstette
BMC bioinformatics 12 (1), 214, 2011
332011
Lightweight comparison of RNAs based on exact sequence–structure matches
S Heyne, S Will, M Beckstette, R Backofen
Bioinformatics 25 (16), 2095-2102, 2009
332009
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Articles 1–20