Judith Klein-Seetharaman

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Valerian KaganProfessor, University of PittsburghVerified email at pitt.edu
Jaime CarbonellProfessor of Computer Science, Carnegie Mellon UniversityVerified email at cs.cmu.edu
Dariush MohammadyaniJanssen: Pharmaceutical Companies of Johnson & JohnsonVerified email at its.jnj.com
Yanjun QiAssociate Professor @CS, University of Virginia/ SCS PhD @ Carnegie Mellon Univ./ DATA Scholar@ NIHVerified email at virginia.edu
Madhavi GanapathirajuAssociate Professor of Biomedical Informatics and Intelligent Systems, University of PittsburghVerified email at pitt.edu
Alexander StarProfessor of Chemistry and Bioengineering, University of PittsburghVerified email at pitt.edu
Ziv Bar-JosephProfessor of Computational Biology and Machine Learning, School of Computer Science, Carnegie Mellon UniversityVerified email at andrew.cmu.edu
Philip J ReevesBiological Sciences, University of EssexVerified email at essex.ac.uk
Michele LoewenNational Research Council of CanadaVerified email at nrc.ca
Joan Planas-IglesiasMasaryk University, Department of Expermiental Biology, Loschmidt LaboratoriesVerified email at mail.muni.cz
Oznur TastanAssistant Prof. @ Sabanci UniversityVerified email at sabanciuniv.edu
Christian AltenbachStein Eye Institute, University of California Los AngelesVerified email at ucla.edu
Raj ReddyUniversity Professor of Computer Science and Robotics, Carnegie Mellon UniversityVerified email at cmu.edu
Arpana DuttaSr. Scientist, Dr. Reddy's LaboratoriesVerified email at case.edu
Brett AllenReaxis Inc.Verified email at reaxis.com
Meghana KshirsagarMicrosoft, AI for GoodVerified email at microsoft.com
Jianfei JiangGraduate School of Public Health, University of PittsburghVerified email at pitt.edu
Natalia BelikovaAnalytical Services Director, SGS Life Sciences ServicesVerified email at sgs.com
Ivet BaharDistinguished Professor and John K Vries Chair, Computational & Systems Biology, U of PittsburghVerified email at pitt.edu
AJ RaderDirector of Data Scientist at DMC InsuranceVerified email at dmcinsurance.com

Judith Klein-Seetharaman

Arizona State University

Verified email at asu.edu - Homepage

G protein coupled receptors membrane proteins biofeedback


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Carbon nanotubes degraded by neutrophil myeloperoxidase induce less pulmonary inflammation VE Kagan, NV Konduru, W Feng, BL Allen, J Conroy, Y Volkov, II Vlasova, ... Nature nanotechnology 5 (5), 354-359, 2010	712	2010
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells CT Chu, J Ji, RK Dagda, JF Jiang, YY Tyurina, AA Kapralov, VA Tyurin, ... Nature cell biology 15 (10), 1197-1205, 2013	700	2013
Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, C St Croix, HH Dar, B Liu, ... Nature chemical biology 13 (1), 81-90, 2017	679	2017
Long-range interactions within a nonnative protein J Klein-Seetharaman, M Oikawa, SB Grimshaw, J Wirmer, E Duchardt, ... Science 295 (5560), 1719-1722, 2002	662	2002
Evaluation of different biological data and computational classification methods for use in protein interaction prediction Y Qi, Z Bar‐Joseph, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 63 (3), 490-500, 2006	431	2006
The enzymatic oxidation of graphene oxide GP Kotchey, BL Allen, H Vedala, N Yanamala, AA Kapralov, YY Tyurina, ... ACS nano 5 (3), 2098-2108, 2011	350	2011
Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes BL Allen, GP Kotchey, Y Chen, NVK Yanamala, J Klein-Seetharaman, ... Journal of the American Chemical Society 131 (47), 17194-17205, 2009	297	2009
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ... Genome biology 9 (1), 1-19, 2008	279	2008
Random forest similarity for protein-protein interaction prediction from multiple sources Y Qi, J Klein-Seetharaman, Z Bar-Joseph Biocomputing 2005, 531-542, 2005	234	2005
Identification of core amino acids stabilizing rhodopsin AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004	177	2004
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration AA Kapralov, WH Feng, AA Amoscato, N Yanamala, K Balasubramanian, ... ACS nano 6 (5), 4147-4156, 2012	168	2012
Prediction of interactions between HIV-1 and human proteins by information integration O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman Biocomputing 2009, 516-527, 2009	168	2009
Biodegradation of single‐walled carbon nanotubes by eosinophil peroxidase FT Andón, AA Kapralov, N Yanamala, W Feng, A Baygan, BJ Chambers, ... Small 9 (16), 2721-2729, 2013	156	2013
Protein classification based on text document classification techniques BYM Cheng, JG Carbonell, J Klein‐Seetharaman Proteins: Structure, Function, and Bioinformatics 58 (4), 955-970, 2005	150	2005
Protein complex identification by supervised graph local clustering Y Qi, F Balem, C Faloutsos, J Klein-Seetharaman, Z Bar-Joseph Bioinformatics 24 (13), i250-i268, 2008	148	2008
Oxidized lipids block antigen cross-presentation by dendritic cells in cancer W Cao, R Ramakrishnan, VA Tuyrin, F Veglia, T Condamine, A Amoscato, ... The Journal of Immunology 192 (6), 2920-2931, 2014	140	2014
A mitochondrial pathway for biosynthesis of lipid mediators YY Tyurina, SM Poloyac, VA Tyurin, AA Kapralov, J Jiang, ... Nature chemistry 6 (6), 542-552, 2014	136	2014
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins Y Qi, O Tastan, JG Carbonell, J Klein-Seetharaman, J Weston Bioinformatics 26 (18), i645-i652, 2010	135	2010
Structure and function in rhodopsin: Mapping light-dependent changes in distance between residue 316 in helix 8 and residues in the sequence 60− 75, covering the cytoplasmic … C Altenbach, J Klein-Seetharaman, K Cai, HG Khorana, WL Hubbell Biochemistry 40 (51), 15493-15500, 2001	131	2001
NMR spectroscopy in studies of light-induced structural changes in mammalian rhodopsin: Applicability of solution 19F NMR J Klein-Seetharaman, EV Getmanova, MC Loewen, PJ Reeves, ... Proceedings of the National Academy of Sciences 96 (24), 13744-13749, 1999	131	1999

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