Folgen
Benjamín J. Sánchez
Benjamín J. Sánchez
Senior Research Scientist @ Chr. Hansen
Bestätigte E-Mail-Adresse bei chr-hansen.com - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Improving the phenotype predictions of a yeast genome‐scale metabolic model by incorporating enzymatic constraints
BJ Sánchez, C Zhang, A Nilsson, PJ Lahtvee, EJ Kerkhoven, J Nielsen
Molecular systems biology 13 (8), 935, 2017
4082017
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
392*2020
RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor
H Wang, S Marcišauskas, BJ Sánchez, I Domenzain, D Hermansson, ...
PLoS computational biology 14 (10), e1006541, 2018
2932018
A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism
H Lu, F Li, BJ Sánchez, Z Zhu, G Li, I Domenzain, S Marcišauskas, ...
Nature communications 10 (1), 3586, 2019
2662019
Combining mechanistic and machine learning models for predictive engineering and optimization of tryptophan metabolism
J Zhang, SD Petersen, T Radivojevic, A Ramirez, A Pérez-Manríquez, ...
Nature communications 11 (1), 4880, 2020
1962020
Absolute quantification of protein and mRNA abundances demonstrate variability in gene-specific translation efficiency in yeast
PJ Lahtvee, BJ Sánchez, A Smialowska, S Kasvandik, IE Elsemman, ...
Cell systems 4 (5), 495-504. e5, 2017
1842017
Genome scale models of yeast: towards standardized evaluation and consistent omic integration
BJ Sánchez, J Nielsen
Integrative Biology 7 (8), 846-858, 2015
792015
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0
I Domenzain, B Sánchez, M Anton, EJ Kerkhoven, A Millán-Oropeza, ...
Nature communications 13 (1), 3766, 2022
752022
Model-assisted fine-tuning of central carbon metabolism in yeast through dCas9-based regulation
R Ferreira, C Skrekas, A Hedin, BJ Sánchez, V Siewers, J Nielsen, ...
ACS Synthetic Biology 8 (11), 2457-2463, 2019
502019
SLIMEr: probing flexibility of lipid metabolism in yeast with an improved constraint-based modeling framework
BJ Sánchez, F Li, EJ Kerkhoven, J Nielsen
BMC systems biology 13, 1-9, 2019
482019
Proteome allocations change linearly with the specific growth rate of Saccharomyces cerevisiae under glucose limitation
J Xia, BJ Sánchez, Y Chen, K Campbell, S Kasvandik, J Nielsen
Nature Communications 13 (1), 2819, 2022
402022
Construction of robust dynamic genome-scale metabolic model structures of Saccharomyces cerevisiae through iterative re-parameterization
BJ Sánchez, JR Pérez-Correa, E Agosin
Metabolic engineering 25, 159-173, 2014
392014
Genome-scale modeling drives 70-fold improvement of intracellular heme production in Saccharomyces cerevisiae
OP Ishchuk, I Domenzain, BJ Sánchez, F Muñiz-Paredes, JL Martínez, ...
Proceedings of the National Academy of Sciences 119 (30), e2108245119, 2022
352022
Benchmarking accuracy and precision of intensity‐based absolute quantification of protein abundances in Saccharomyces cerevisiae
BJ Sánchez, PJ Lahtvee, K Campbell, S Kasvandik, R Yu, I Domenzain, ...
Proteomics 21 (6), 2000093, 2021
212021
Genome-scale metabolic modeling of P. thermoglucosidasius NCIMB 11955 reveals metabolic bottlenecks in anaerobic metabolism
V Mol, M Bennett, BJ Sánchez, BK Lisowska, MJ Herrgård, AT Nielsen, ...
Metabolic Engineering 65, 123-134, 2021
162021
HIPPO: An iterative reparametrization method for identification and calibration of dynamic bioreactor models of complex processes
BJ Sanchez, DC Soto, H Jorquera, CA Gelmi, JR Perez-Correa
Industrial & Engineering Chemistry Research 53 (48), 18514-18525, 2014
92014
DebaryOmics: an integrative –omics study to understand the halophilic behaviour of Debaryomyces hansenii
C Navarrete, BJ Sánchez, S Savickas, JL Martínez
Microbial Biotechnology 15 (4), 1133-1151, 2022
62022
Emergence of phenotypically distinct subpopulations is a factor in adaptation of recombinant Saccharomyces cerevisiae under glucose-limited conditions
NR Wright, MM Jessop-Fabre, BJ Sánchez, T Wulff, CT Workman, ...
Applied and Environmental Microbiology 88 (7), e02307-21, 2022
42022
From genotype to phenotype: computational approaches for inferring microbial traits relevant to the food industry
ST Karlsen, MH Rau, BJ Sánchez, K Jensen, AA Zeidan
FEMS Microbiology Reviews 47 (4), fuad030, 2023
32023
standard-GEM: standardization of open-source genome-scale metabolic models
M Anton, E Almaas, R Benfeitas, S Benito-Vaquerizo, LM Blank, A Dräger, ...
bioRxiv, 2023.03. 21.512712, 2023
32023
Das System kann den Vorgang jetzt nicht ausführen. Versuchen Sie es später erneut.
Artikel 1–20