|Field-deployable viral diagnostics using CRISPR-Cas13|
C Myhrvold, CA Freije, JS Gootenberg, OO Abudayyeh, HC Metsky, ...
Science 360 (6387), 444-448, 2018
|Zika virus evolution and spread in the Americas|
HC Metsky, CB Matranga, S Wohl, SF Schaffner, CA Freije, SM Winnicki, ...
Nature 546 (7658), 411-415, 2017
|Genomic epidemiology reveals multiple introductions of Zika virus into the United States|
ND Grubaugh, JT Ladner, MUG Kraemer, G Dudas, AL Tan, ...
Nature 546 (7658), 401-405, 2017
|Directionally selected cytochrome P450 alleles are driving the spread of pyrethroid resistance in the major malaria vector Anopheles funestus|
JM Riveron, H Irving, M Ndula, KG Barnes, SS Ibrahim, MJI Paine, ...
Proceedings of the National Academy of Sciences 110 (1), 252-257, 2013
|Impact of pyrethroid resistance on operational malaria control in Malawi|
CS Wondji, M Coleman, I Kleinschmidt, T Mzilahowa, H Irving, M Ndula, ...
Proceedings of the National Academy of Sciences 109 (47), 19063-19070, 2012
|Genomic analysis of Lassa virus during an increase in cases in Nigeria in 2018|
KJ Siddle, P Eromon, KG Barnes, S Mehta, JU Oguzie, I Odia, ...
New England Journal of Medicine 379 (18), 1745-1753, 2018
|Widespread pyrethroid and DDT resistance in the major malaria vector Anopheles funestus in East Africa is driven by metabolic resistance mechanisms|
C Mulamba, JM Riveron, SS Ibrahim, H Irving, KG Barnes, LG Mukwaya, ...
PloS one 9 (10), e110058, 2014
|Rise of multiple insecticide resistance in Anopheles funestus in Malawi: a major concern for malaria vector control|
JM Riveron, M Chiumia, BD Menze, KG Barnes, H Irving, SS Ibrahim, ...
Malaria journal 14, 1-9, 2015
|Hybrid selection for sequencing pathogen genomes from clinical samples|
A Melnikov, K Galinsky, P Rogov, T Fennell, D Van Tyne, C Russ, ...
Genome biology 12 (8), 1-9, 2011
|Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum|
D Van Tyne, DJ Park, SF Schaffner, DE Neafsey, E Angelino, JF Cortese, ...
PLoS genetics 7 (4), e1001383, 2011
|The highly polymorphic CYP6M7 cytochrome P450 gene partners with the directionally selected CYP6P9a and CYP6P9b genes to expand the pyrethroid resistance front in …|
JM Riveron, SS Ibrahim, E Chanda, T Mzilahowa, N Cuamba, H Irving, ...
BMC genomics 15, 1-19, 2014
|Deployable CRISPR-Cas13a diagnostic tools to detect and report Ebola and Lassa virus cases in real-time|
KG Barnes, AE Lachenauer, A Nitido, S Siddiqui, R Gross, B Beitzel, ...
Nature communications 11 (1), 4131, 2020
|Capturing sequence diversity in metagenomes with comprehensive and scalable probe design|
HC Metsky, KJ Siddle, A Gladden-Young, J Qu, DK Yang, P Brehio, ...
Nature biotechnology 37 (2), 160-168, 2019
|Genomic footprints of selective sweeps from metabolic resistance to pyrethroids in African malaria vectors are driven by scale up of insecticide-based vector control|
KG Barnes, GD Weedall, M Ndula, H Irving, T Mzihalowa, J Hemingway, ...
PLoS genetics 13 (2), e1006539, 2017
|Single-cell profiling of Ebola virus disease in vivo reveals viral and host dynamics|
D Kotliar, AE Lin, J Logue, TK Hughes, NM Khoury, SS Raju, ...
Cell 183 (5), 1383-1401. e19, 2020
|Ebola virus persistence in ocular tissues and fluids (EVICT) study: reverse transcription-polymerase chain reaction and cataract surgery outcomes of Ebola survivors in Sierra Leone|
JG Shantha, JG Mattia, A Goba, KG Barnes, FK Ebrahim, CS Kraft, ...
EBioMedicine 30, 217-224, 2018
|Field validation of recombinant antigen immunoassays for diagnosis of Lassa fever|
ML Boisen, JN Hartnett, JG Shaffer, A Goba, M Momoh, JD Sandi, ...
Scientific reports 8 (1), 5939, 2018
|SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites|
A Amambua-Ngwa, DJ Park, SK Volkman, KG Barnes, AK Bei, AK Lukens, ...
Molecular biology and evolution 29 (11), 3249-3253, 2012
|Restriction to gene flow is associated with changes in the molecular basis of pyrethroid resistance in the malaria vector Anopheles funestus|
KG Barnes, H Irving, M Chiumia, T Mzilahowa, M Coleman, J Hemingway, ...
Proceedings of the National Academy of Sciences 114 (2), 286-291, 2017
|Retrospective cohort study of Lassa fever in pregnancy, Southern Nigeria|
S Okogbenin, J Okoeguale, G Akpede, A Colubri, KG Barnes, S Mehta, ...
Emerging Infectious Diseases 25 (8), 1494, 2019