Michael Hallock
Michael Hallock
Verified email at illinois.edu
Title
Cited by
Cited by
Year
Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations
MJ Hallock, JE Stone, E Roberts, C Fry, Z Luthey-Schulten
Parallel computing 40 (5-6), 86-99, 2014
392014
Toward a whole-cell model of ribosome biogenesis: kinetic modeling of SSU assembly
TM Earnest, J Lai, K Chen, MJ Hallock, JR Williamson, Z Luthey-Schulten
Biophysical journal 109 (6), 1117-1135, 2015
192015
Evaluation of emerging energy-efficient heterogeneous computing platforms for biomolecular and cellular simulation workloads
JE Stone, MJ Hallock, JC Phillips, JR Peterson, Z Luthey-Schulten, ...
2016 IEEE International Parallel and Distributed Processing Symposium …, 2016
182016
A problem solving environment for stochastic biological simulations
JR Peterson, MJ Hallock, JA Cole, Z Luthey-Schulten
PyHPC'13: Proceedings of the 3rd Workshop on Python for High-Performance and …, 2013
152013
Ribosome biogenesis in replicating cells: integration of experiment and theory
TM Earnest, JA Cole, JR Peterson, MJ Hallock, TE Kuhlman, ...
Biopolymers 105 (10), 735-751, 2016
122016
Calcium-induced lipid nanocluster structures: sculpturing of the plasma membrane
MJ Hallock, AI Greenwood, Y Wang, JH Morrissey, E Tajkhorshid, ...
Biochemistry 57 (50), 6897-6905, 2018
82018
Improving reaction kernel performance in lattice microbes: Particle-wise propensities and run-time generated code
MJ Hallock, Z Luthey-Schulten
2016 IEEE International Parallel and Distributed Processing Symposium …, 2016
82016
Stochastic simulations of cellular processes: from single cells to colonies
J Cole, MJ Hallock, P Labhsetwar, JR Peterson, JE Stone, ...
Computational Systems Biology: From Molecular Mechanisms to Disease: Second …, 2013
72013
VITAL NMR: using chemical shift derived secondary structure information for a limited set of amino acids to assess homology model accuracy
MC Brothers, AE Nesbitt, MJ Hallock, SG Rupasinghe, M Tang, J Harris, ...
Journal of biomolecular NMR 52 (1), 41-56, 2012
22012
Hybrid CME–ODE method for efficient simulation of the galactose switch in yeast
DM Bianchi, JR Peterson, TM Earnest, MJ Hallock, Z Luthey-Schulten
IET Systems Biology 12 (4), 170-176, 2018
12018
Calcium-Induced Sculpturing of the Plasma Membrane: Lipid Microclusters Cast by Anionic Lipids
MJ Hallock, A Greenwood, Y Wang, JH Morrissey, E Tajkhorshid, ...
Biophysical Journal 112 (3), 467a-468a, 2017
12017
Lattice microbes problem solving environment instruction guide
JR Peterson, MJ Hallock, E Roberts, JA Cole, P Labhsetwar, JE Stone, ...
12014
Abstract P1-06-03: Breast cancers exhibit diverse metabolic cross-feeding behaviors associated with differing long-term survival
JR Peterson, JA Cole, TM Earnest, MJ Hallock, T Pandey, K Ritchie, ...
Cancer Research 80 (4 Supplement), P1-06-03-P1-06-03, 2020
2020
Abstract P1-06-04: SimBioSys TumorScope: Spatio-temporal modeling of the breast tumor microenvironment accurately predicts chemotherapeutic response
JA Cole, JR Peterson, TM Earnest, MJ Hallock, E Braun
Cancer Research 80 (4 Supplement), P1-06-04-P1-06-04, 2020
2020
SimBioSys TumorScope: Spatio-temporal modeling of the breast tumor microenvironment accurately predicts chemotherapeutic response
JA Cole Jr, JR Peterson, TM Earnest, MJ Hallock, E Braun
CANCER RESEARCH 80 (4), 2020
2020
Breast cancers exhibit diverse metabolic cross-feeding behaviors associated with differing long-term survival
JR Peterson, JA Cole Jr, TM Earnest, MJ Hallock, T Pandey, K Ritchie, ...
CANCER RESEARCH 80 (4), 2020
2020
Integration of Reaction-Diffusion Master Equation and Brownian Dynamics Methodologies to Simulate a Minimal Cell
TM Earnest, MJ Hallock, Z Luthey-Schulten
Biophysical Journal 116 (3), 273a-274a, 2019
2019
Anionic Lipids Take Charge: Juxtamembrane Domain Interactions with Cellular Membrane
MJ Hallock, YA Golubeva, TV Pogorelov
Biophysical Journal 114 (3), 463a, 2018
2018
Capturing Transmembrane Dimer Structures with Mobile Membranes: Point Mutations Take Charge
TV Pogorelov, MJ Hallock, YA Golubeva
Biophysical Journal 110 (3), 427a-428a, 2016
2016
CDD: computational discovery desktop
VM Anisimov, MJ Hallock, TV Pogorelov
Proceedings of the 2015 XSEDE Conference: Scientific Advancements Enabled by …, 2015
2015
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Articles 1–20