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Jean Fred Fontaine
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HIPPIE: Integrating protein interaction networks with experiment based quality scores
MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ...
PloS one 7 (2), e31826, 2012
3982012
Aversion to nicotine is regulated by the balanced activity of β4 and α5 nicotinic receptor subunits in the medial habenula
S Frahm, MA Ślimak, L Ferrarese, J Santos-Torres, B Antolin-Fontes, ...
Neuron 70 (3), 522-535, 2011
3182011
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
M Krallinger, M Vazquez, F Leitner, D Salgado, A Chatr-aryamontri, ...
BMC bioinformatics 12 (8), S3, 2011
1932011
MedlineRanker: flexible ranking of biomedical literature
JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ...
Nucleic acids research 37 (suppl_2), W141-W146, 2009
1422009
CXCL5 limits macrophage foam cell formation in atherosclerosis
A Rousselle, F Qadri, L Leukel, R Yilmaz, JF Fontaine, G Sihn, M Bader, ...
The Journal of clinical investigation 123 (3), 1343-1347, 2013
1232013
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions
MH Schaefer, TJS Lopes, N Mah, JE Shoemaker, Y Matsuoka, ...
PLoS computational biology 9 (1), e1002860, 2013
992013
Génie: literature-based gene prioritization at multi genomic scale
JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro
Nucleic Acids Research 39 (suppl 2), W455, 2011
972011
Mutually exclusive signaling signatures define the hepatic and pancreatic progenitor cell lineage divergence
E Rodríguez-Seguel, N Mah, H Naumann, IM Pongrac, N Cerdá-Esteban, ...
Genes & development 27 (17), 1932-1946, 2013
912013
The ERPIN server: an interface to profile-based RNA motif identification
A Lambert, JF Fontaine, M Legendre, F Leclerc, E Permal, F Major, ...
Nucleic Acids Research 32 (suppl_2), W160-W165, 2004
722004
PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries
A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ...
BMC bioinformatics 12, 1-9, 2011
702011
Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases
TJS Lopes, M Schaefer, J Shoemaker, Y Matsuoka, J Fontaine, ...
Bioinformatics 27 (17), 2414-2421, 2011
702011
Interactome mapping provides a network of neurodegenerative disease proteins and uncovers widespread protein aggregation in affected brains
C Haenig, N Atias, AK Taylor, A Mazza, MH Schaefer, J Russ, ...
Cell reports 32 (7), 2020
692020
Increasing the number of thyroid lesions classes in microarray analysis improves the relevance of diagnostic markers
JF Fontaine, D Mirebeau-Prunier, M Raharijaona, B Franc, S Triau, ...
PLoS One 4 (10), e7632, 2009
582009
Death-associated protein 3 is overexpressed in human thyroid oncocytic tumours
C Jacques, JF Fontaine, B Franc, D Mirebeau-Prunier, S Triau, ...
British journal of cancer 101 (1), 132-138, 2009
572009
Estrogen-related receptor alpha modulates lactate dehydrogenase activity in thyroid tumors
D Mirebeau-Prunier, S Le Pennec, C Jacques, JF Fontaine, N Gueguen, ...
PloS one 8 (3), e58683, 2013
542013
A roadmap of constitutive NF-κB activity in Hodgkin lymphoma: Dominant roles of p50 and p52 revealed by genome-wide analyses
KAP de Oliveira, E Kaergel, M Heinig, JF Fontaine, G Patone, EM Muro, ...
Genome medicine 8, 1-16, 2016
502016
Laitor-literature assistant for identification of terms co-occurrences and relationships
A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ...
BMC bioinformatics 11, 1-10, 2010
482010
DNA microarray and miRNA analyses reinforce the classification of follicular thyroid tumors
C Jacques, D Guillotin, JF Fontaine, B Franc, D Mirebeau-Prunier, ...
The Journal of Clinical Endocrinology & Metabolism 98 (5), E981-E989, 2013
422013
Microarray analysis refines classification of non-medullary thyroid tumours of uncertain malignancy
JF Fontaine, D Mirebeau-Prunier, B Franc, S Triau, P Rodien, R Houlgatte, ...
Oncogene 27 (15), 2228-2236, 2007
412007
METHODS FOR THE PROGNOSIS OR FOR THE DIAGNOSIS OF A THYROID DISEASE
R Houlgatte, F Nee, M Brigitte, J Fontaine, Y Malthiery, F Savagner
EP Patent 2,132,329, 2009
402009
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Articles 1–20