Thomas Hackl
Thomas Hackl
Max Planck Institute for Medical Research
Verified email at mr.mpg.de - Homepage
Title
Cited by
Cited by
Year
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
T Hackl, R Hedrich, J Schultz, F Förster
Bioinformatics 30 (21), 3004-3011, 2014
3092014
ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies
C Koetschan, T Hackl, T Müller, M Wolf, F Förster, J Schultz
Molecular Phylogenetics and Evolution 63 (3), 585-588, 2012
1272012
Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization
BM Slaby, T Hackl, H Horn, K Bayer, U Hentschel
The ISME journal 11 (11), 2465-2478, 2017
712017
Host genome integration and giant virus-induced reactivation of the virophage mavirus
MG Fischer, T Hackl
Nature 540 (7632), 288-291, 2016
702016
The ITS2 database
B Merget, C Koetschan, T Hackl, F Förster, T Dandekar, T Müller, ...
JoVE (Journal of Visualized Experiments), e3806, 2012
522012
Marine microbial metagenomes sampled across space and time
SJ Biller, PM Berube, K Dooley, M Williams, BM Satinsky, T Hackl, ...
Scientific data 5, 180176, 2018
392018
AliTV—interactive visualization of whole genome comparisons
MJ Ankenbrand, S Hohlfeld, T Hackl, F Förster
PeerJ Computer Science 3, e116, 2017
282017
Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments
PM Berube, SJ Biller, T Hackl, SL Hogle, BM Satinsky, JW Becker, ...
Scientific data 5, 180154, 2018
262018
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
MJ Ankenbrand, S Pfaff, N Terhoeven, M Qureischi, M Gündel, CL Weiß, ...
The Journal of Open Source Software 3 (21), 464, 2018
92018
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis
T Hackl, R Martin, K Barenhoff, S Duponchel, D Heider, MG Fischer
Scientific data 7 (1), 1-9, 2020
62020
Improving draft genome contiguity with reference-derived in silico mate-pair libraries
JH Grau, T Hackl, KP Koepfli, M Hofreiter
GigaScience 7 (5), giy029, 2018
62018
Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory
G Palfalvi, T Hackl, N Terhoeven, TF Shibata, T Nishiyama, ...
Current Biology, 2020
32020
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome
N Terhoeven, J Schultz, T Hackl
Journal of Open Source Software, 2018
32018
A draft genome for the Venus flytrap, Dionaea muscipula: Evaluation of assembly strategies for a complex Genome–Development of novel approaches and bioinformatics solutions
T Hackl
12016
Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate
R Massana, A Labarre, D López-Escardó, A Obiol, F Bucchini, T Hackl, ...
The ISME Journal, 1-14, 2020
2020
MOSGA: Modular Open-Source Genome Annotator
R Martin, T Hackl, G Hattab, MG Fischer, D Heider
arXiv preprint arXiv:2009.03758, 2020
2020
Rapid in vitro prototyping of O-methyltransferases for pathway applications in Escherichia coli
K Haslinger, T Hackl, KL Prather
bioRxiv, 2020
2020
Visualization of giant virus particles using BONCAT labeling and STED microscopy
M Berjón-Otero, S Duponchel, T Hackl, MG Fischer
bioRxiv, 2020
2020
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