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Thomas Hackl
Thomas Hackl
Groningen Institute for Evolutionary Life Sciences
Verified email at rug.nl - Homepage
Title
Cited by
Cited by
Year
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
T Hackl, R Hedrich, J Schultz, F Förster
Bioinformatics 30 (21), 3004-3011, 2014
4862014
Marine microbial metagenomes sampled across space and time
SJ Biller, PM Berube, K Dooley, M Williams, BM Satinsky, T Hackl, ...
Scientific data 5 (1), 1-7, 2018
1652018
Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization
BM Slaby, T Hackl, H Horn, K Bayer, U Hentschel
The ISME journal 11 (11), 2465-2478, 2017
1612017
ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies
C Koetschan, T Hackl, T Müller, M Wolf, F Förster, J Schultz
Molecular Phylogenetics and Evolution 63 (3), 585-588, 2012
1602012
Host genome integration and giant virus-induced reactivation of the virophage mavirus
MG Fischer, T Hackl
Nature 540 (7632), 288-291, 2016
1372016
Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments
PM Berube, SJ Biller, T Hackl, SL Hogle, BM Satinsky, JW Becker, ...
Scientific data 5 (1), 1-11, 2018
792018
The ITS2 database
B Merget, C Koetschan, T Hackl, F Förster, T Dandekar, T Müller, ...
JoVE (Journal of Visualized Experiments), e3806, 2012
772012
AliTV—interactive visualization of whole genome comparisons
MJ Ankenbrand, S Hohlfeld, T Hackl, F Förster
PeerJ Computer Science 3, e116, 2017
742017
Genomes of the Venus flytrap and close relatives unveil the roots of plant carnivory
G Palfalvi, T Hackl, N Terhoeven, TF Shibata, T Nishiyama, ...
Current Biology 30 (12), 2312-2320. e5, 2020
632020
Novel integrative elements and genomic plasticity in ocean ecosystems
T Hackl, R Laurenceau, MJ Ankenbrand, C Bliem, Z Cariani, E Thomas, ...
Cell 186 (1), 47-62. e16, 2023
482023
Phosphonate production by marine microbes: exploring new sources and potential function
M Acker, SL Hogle, PM Berube, T Hackl, A Coe, R Stepanauskas, ...
Proceedings of the National Academy of Sciences 119 (11), e2113386119, 2022
412022
Virophages and retrotransposons colonize the genomes of a heterotrophic flagellate
T Hackl, S Duponchel, K Barenhoff, A Weinmann, MG Fischer
Elife 10, e72674, 2021
36*2021
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
MJ Ankenbrand, S Pfaff, N Terhoeven, M Qureischi, M Gündel, CL Weiß, ...
The Journal of Open Source Software 3 (21), 464, 2018
262018
Genetic engineering of marine cyanophages reveals integration but not lysogeny in T7-like cyanophages
D Shitrit, T Hackl, R Laurenceau, N Raho, MCG Carlson, G Sabehi, ...
The ISME journal 16 (2), 488-499, 2022
242022
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis
T Hackl, R Martin, K Barenhoff, S Duponchel, D Heider, MG Fischer
Scientific Data 7 (1), 29, 2020
222020
Large-scale invasion of unicellular eukaryotic genomes by integrating DNA viruses
C Bellas, T Hackl, MS Plakolb, A Koslová, MG Fischer, R Sommaruga
Proceedings of the National Academy of Sciences 120 (16), e2300465120, 2023
202023
Siderophores as an iron source for picocyanobacteria in deep chlorophyll maximum layers of the oligotrophic ocean
SL Hogle, T Hackl, RM Bundy, J Park, B Satinsky, T Hiltunen, S Biller, ...
The ISME Journal 16 (6), 1636-1646, 2022
192022
Improving draft genome contiguity with reference-derived in silico mate-pair libraries
JH Grau, T Hackl, KP Koepfli, M Hofreiter
GigaScience 7 (5), giy029, 2018
182018
Gene expression during bacterivorous growth of a widespread marine heterotrophic flagellate
R Massana, A Labarre, D López-Escardó, A Obiol, F Bucchini, T Hackl, ...
The ISME Journal 15 (1), 154-167, 2021
162021
Updated virophage taxonomy and distinction from polinton-like viruses
S Roux, MG Fischer, T Hackl, LA Katz, F Schulz, N Yutin
Biomolecules 13 (2), 204, 2023
142023
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