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Jesse RR Zaneveld
Jesse RR Zaneveld
Associate Professor, Division of Biological Sciences, University of Washington, Bothell
Bestätigte E-Mail-Adresse bei uw.edu
Titel
Zitiert von
Zitiert von
Jahr
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
361012010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
172832019
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
MGI Langille, J Zaneveld, JG Caporaso, D McDonald, D Knights, ...
Nature biotechnology 31 (9), 814-821, 2013
89212013
PICRUSt2 for prediction of metagenome functions
GM Douglas, VJ Maffei, JR Zaneveld, SN Yurgel, JR Brown, CM Taylor, ...
Nature biotechnology 38 (6), 685-688, 2020
4485*2020
A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature, 2017
24432017
Normalization and microbial differential abundance strategies depend upon data characteristics
S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ...
Microbiome 5, 1-18, 2017
19942017
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
N Fierer, CL Lauber, KS Ramirez, J Zaneveld, MA Bradford, R Knight
The ISME journal 6 (5), 1007-1017, 2012
17852012
Best practices for analysing microbiomes
R Knight, A Vrbanac, BC Taylor, A Aksenov, C Callewaert, J Debelius, ...
Nature Reviews Microbiology 16 (7), 410-422, 2018
16342018
Bayesian community-wide culture-independent microbial source tracking
D Knights, J Kuczynski, ES Charlson, J Zaneveld, MC Mozer, RG Collman, ...
Nature methods 8 (9), 761-763, 2011
15902011
Stress and stability: applying the Anna Karenina principle to animal microbiomes
JR Zaneveld, R McMinds, R Vega Thurber
Nature Microbiology, 2017
8302017
Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales
JR Zaneveld, DE Burkepile, AA Shantz, CE Pritchard, R McMinds, ...
Nature communications 7 (1), 1-12, 2016
5492016
Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching
RL Vega Thurber, DE Burkepile, C Fuchs, AA Shantz, R McMinds, ...
Global change biology 20 (2), 544-554, 2014
5462014
Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny
FJ Pollock, R McMinds, S Smith, DG Bourne, BL Willis, M Medina, ...
Nature communications 9 (1), 4921, 2018
3332018
Natural volcanic CO2 seeps reveal future trajectories for host–microbial associations in corals and sponges
KM Morrow, DG Bourne, C Humphrey, ES Botté, P Laffy, J Zaneveld, ...
The ISME journal 9 (4), 894-908, 2015
2832015
Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins
EE Hansen, CA Lozupone, FE Rey, M Wu, JL Guruge, A Narra, ...
Proceedings of the National Academy of Sciences 108 (supplement_1), 4599-4606, 2011
2692011
One health relationships between human, animal, and environmental microbiomes: a mini-review
P Trinh, JR Zaneveld, S Safranek, PM Rabinowitz
Frontiers in public health 6, 235, 2018
2112018
Direct sequencing of the human microbiome readily reveals community differences
J Kuczynski, EK Costello, DR Nemergut, J Zaneveld, CL Lauber, ...
Genome biology 11, 1-9, 2010
2002010
Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts
C Lozupone, K Faust, J Raes, JJ Faith, DN Frank, J Zaneveld, JI Gordon, ...
Genome Research, 2012
1932012
Human-associated microbial signatures: examining their predictive value
D Knights, LW Parfrey, J Zaneveld, C Lozupone, R Knight
Cell host & microbe 10 (4), 292-296, 2011
1792011
Host-bacterial coevolution and the search for new drug targets
J Zaneveld, PJ Turnbaugh, C Lozupone, RE Ley, M Hamady, JI Gordon, ...
Current opinion in chemical biology 12 (1), 109-114, 2008
1342008
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