Ruping Sun
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Integrative genome analyses identify key somatic driver mutations of small-cell lung cancer
M Peifer, L FernŠndez-Cuesta, ML Sos, J George, D Seidel, LH Kasper, ...
Nature Genetics 44 (10), 1104-1110, 2012
X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes
H Hu, SA Haas, J Chelly, H Van Esch, M Raynaud, APM De Brouwer, ...
Molecular psychiatry 21 (1), 133-148, 2016
Frequent mutations in chromatin-remodelling genes in pulmonary carcinoids
L Fernandez-Cuesta, M Peifer, X Lu, R Sun, L Ozretić, D Seidel, T Zander, ...
Nature communications 5 (1), 1-7, 2014
CD74–NRG1 fusions in lung adenocarcinoma
L Fernandez-Cuesta, D Plenker, H Osada, R Sun, R Menon, F Leenders, ...
Cancer discovery 4 (4), 415-422, 2014
Promoter of lncRNA gene PVT1 is a tumor-suppressor DNA boundary element
SW Cho, J Xu, R Sun, MR Mumbach, AC Carter, YG Chen, KE Yost, J Kim, ...
Cell 173 (6), 1398-1412. e22, 2018
Quantitative evidence for early metastatic seeding in colorectal cancer
Z Hu, J Ding, Z Ma, R Sun, JA Seoane, JS Shaffer, CJ Suarez, ...
Nature genetics 51 (7), 1113, 2019
Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors
J George, V Walter, M Peifer, LB Alexandrov, D Seidel, F Leenders, ...
Nature communications 9 (1), 1-13, 2018
Between-region genetic divergence reflects the mode and tempo of tumor evolution
R Sun, Z Hu, A Sottoriva, TA Graham, A Harpak, Z Ma, JM Fischer, ...
Nature genetics 49 (7), 1015-1024, 2017
Detecting genomic indel variants with exact breakpoints in single-and paired-end sequencing data using SplazerS
AK Emde, MH Schulz, D Weese, R Sun, M Vingron, VM Kalscheuer, ...
Bioinformatics 28 (5), 619-627, 2012
Modeling read counts for CNV detection in exome sequencing data
MI Love, A MyšičkovŠ, R Sun, V Kalscheuer, M Vingron, SA Haas
Statistical applications in genetics and molecular biology 10 (1), 2011
Identification of novel fusion genes in lung cancer using breakpoint assembly of transcriptome sequencing data
RS Lynnette Fernandez-Cuesta
Genome Biology 16 (1), 7, 2015
Global gene expression analysis reveals reduced abundance of putative microRNA targets in human prostate tumours
R Sun, X Fu, Y Li, Y Xie, Y Mao
BMC genomics 10 (1), 93, 2009
A population genetics perspective on the determinants of intra-tumor heterogeneity
Z Hu, R Sun, C Curtis
Biochimica et Biophysica Acta (BBA)-Reviews on Cancer 1867 (2), 109-126, 2017
Simultaneously detection of genomic and expression alterations in prostate cancer using cDNA microarray
M Jiang, M Li, X Fu, Y Huang, H Qian, R Sun, Y Mao, Y Xie, Y Li
The Prostate 68 (14), 1496-1509, 2008
Breakpointer: using local mapping artifacts to support sequence breakpoint discovery from single-end reads
R Sun, MI Love, T Zemojtel, AK Emde, HR Chung, M Vingron, SA Haas
Bioinformatics 28 (7), 1024-1025, 2012
Big bang tumor growth and clonal evolution
R Sun, Z Hu, C Curtis
Cold Spring Harbor perspectives in medicine 8 (5), a028381, 2018
CD74-NRG1 fusions in lung adenocarcinoma. Cancer Discov. 2014; 4: 415–422. doi: 10.1158/2159-8290
L Fernandez-Cuesta, D Plenker, H Osada, R Sun, R Menon, F Leenders, ...
CD-13-0633.[Abstract][CrossRef][Google Scholar], 0
Clonal replacement and heterogeneity in breast tumors treated with neoadjuvant HER2-targeted therapy
JL Caswell-Jin, K McNamara, JG Reiter, R Sun, Z Hu, Z Ma, J Ding, ...
Nature communications 10 (1), 1-12, 2019
Molecular cloning and characterization of AAAS-V2, a novel splice variant of human AAAS
X Li, C Ji, J Gu, J Xu, Z Jin, L Sun, X Zou, Y Lin, R Sun, P Wang, S Gu, ...
Molecular biology reports 32 (2), 127-131, 2005
Genomic characterization of large-cell neuroendocrine lung tumors
L Fernandez-Cuesta, M Peifer, J George, A De Reynies, R Sun, ...
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