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Ali Shojaie
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Neural granger causality
A Tank, I Covert, N Foti, A Shojaie, EB Fox
IEEE Transactions on Pattern Analysis and Machine Intelligence 44 (8), 4267-4279, 2021
286*2021
Using Twitter for demographic and social science research: Tools for data collection and processing
TH McCormick, H Lee, N Cesare, A Shojaie, ES Spiro
Sociological methods & research 46 (3), 390-421, 2017
2762017
Discovering graphical Granger causality using the truncating lasso penalty
A Shojaie, G Michailidis
Bioinformatics 26 (18), i517-i523, 2010
2282010
Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs
A Shojaie, G Michailidis
Biometrika 97 (3), 519-538, 2010
2082010
Metabolomic profiling reveals potential markers and bioprocesses altered in bladder cancer progression
N Putluri, A Shojaie, VT Vasu, SK Vareed, S Nalluri, V Putluri, ...
Cancer research 71 (24), 7376-7386, 2011
1942011
Granger causality: A review and recent advances
A Shojaie, EB Fox
Annual Review of Statistics and Its Application 9, 289-319, 2022
1652022
Analysis of gene sets based on the underlying regulatory network
A Shojaie, G Michailidis
Journal of Computational Biology 16 (3), 407-426, 2009
1592009
Selection and estimation for mixed graphical models
S Chen, DM Witten, A Shojaie
Biometrika 102 (1), 47-64, 2015
1472015
Network granger causality with inherent grouping structure
S Basu, A Shojaie, G Michailidis
The Journal of Machine Learning Research 16 (1), 417-453, 2015
1262015
Gene set analysis methods: a systematic comparison
R Mathur, D Rotroff, J Ma, A Shojaie, A Motsinger-Reif
BioData mining 11, 1-19, 2018
1012018
Metabolomic profiling reveals a role for androgen in activating amino acid metabolism and methylation in prostate cancer cells
N Putluri, A Shojaie, VT Vasu, S Nalluri, SK Vareed, V Putluri, ...
PloS one 6 (7), e21417, 2011
972011
Graph estimation with joint additive models
A Voorman, A Shojaie, D Witten
Biometrika 101 (1), 85-101, 2014
882014
Inter-individual differences in response to dietary intervention: integrating omics platforms towards personalised dietary recommendations
JW Lampe, SL Navarro, MAJ Hullar, A Shojaie
Proceedings of the Nutrition Society 72 (2), 207-218, 2013
862013
The cluster graphical lasso for improved estimation of Gaussian graphical models
KM Tan, D Witten, A Shojaie
Computational statistics & data analysis 85, 23-36, 2015
832015
Inhibition of the hexosamine biosynthetic pathway promotes castration-resistant prostate cancer
AK Kaushik, A Shojaie, K Panzitt, R Sonavane, H Venghatakrishnan, ...
Nature communications 7 (1), 11612, 2016
822016
Network enrichment analysis in complex experiments
A Shojaie, G Michailidis
Statistical applications in genetics and molecular biology 9 (1), 2010
802010
Estimation of high-dimensional graphical models using regularized score matching
L Lin, M Drton, A Shojaie
Electronic journal of statistics 10 (1), 806, 2016
782016
In defense of the indefensible: A very naive approach to high-dimensional inference
S Zhao, D Witten, A Shojaie
Statistical science: a review journal of the Institute of Mathematical …, 2021
772021
Joint structural break detection and parameter estimation in high-dimensional nonstationary VAR models
A Safikhani, A Shojaie
Journal of the American Statistical Association 117 (537), 251-264, 2022
76*2022
A comparative study of topology-based pathway enrichment analysis methods
J Ma, A Shojaie, G Michailidis
BMC bioinformatics 20, 1-14, 2019
732019
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