Follow
Luis F. de Figueiredo
Luis F. de Figueiredo
Unknown affiliation
Verified email at tecnico.ulisboa.pt - Homepage
Title
Cited by
Cited by
Year
Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria
S Pande, H Merker, K Bohl, M Reichelt, S Schuster, LF De Figueiredo, ...
The ISME journal 8 (5), 953-962, 2014
3012014
Computing the shortest elementary flux modes in genome-scale metabolic networks
LF De Figueiredo, A Podhorski, A Rubio, C Kaleta, JE Beasley, ...
Bioinformatics 25 (23), 3158, 2009
2312009
KNIME-CDK: Workflow-driven cheminformatics
S Beisken, T Meinl, B Wiswedel, LF de Figueiredo, M Berthold, ...
BMC bioinformatics 14, 1-4, 2013
1682013
Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns
C Kaleta, LF De Figueiredo, S Schuster
Genome Research 19 (10), 1872-1883, 2009
1372009
Metabolic reconstruction, constraint-based analysis and game theory to probe genome-scale metabolic networks
E Ruppin, JA Papin, LF De Figueiredo, S Schuster
Current opinion in biotechnology 21 (4), 502-510, 2010
1062010
Can sugars be produced from fatty acids? A test case for pathway analysis tools
LF De Figueiredo, S Schuster, C Kaleta, DA Fell
Bioinformatics 24 (22), 2615-2621, 2008
1012008
Pathway analysis of NAD+ metabolism
F Luis, IG Toni, Z Mathias, S Stefan
Biochemical Journal 439 (2), 341-348, 2011
74*2011
Exploring metabolic pathways in genome-scale networks via generating flux modes
A Rezola, LF de Figueiredo, M Brock, J Pey, A Podhorski, C Wittmann, ...
Bioinformatics 27 (4), 534, 2011
732011
EFMEvolver: Computing elementary flux modes in genome-scale metabolic networks
C Kaleta, LF Figueiredo, J Behre, S Schuster
Gesellschaft für Informatik eV, 2009
602009
nmrML: a community supported open data standard for the description, storage, and exchange of NMR data
D Schober, D Jacob, M Wilson, JA Cruz, A Marcu, JR Grant, A Moing, ...
Analytical chemistry 90 (1), 649-656, 2018
592018
In Silico Evidence for Gluconeogenesis from Fatty Acids in Humans
C Kaleta, LF de Figueiredo, S Werner, R Guthke, M Ristow, S Schuster
PLoS Computational Biology 7 (7), e1002116, 2011
592011
NAD biosynthesis and salvage‐a phylogenetic perspective
TI Gossmann, M Ziegler, P Puntervoll, LF de Figueiredo, S Schuster, ...
FEBS Journal, 2012
582012
Combining metabolic pathway analysis with evolutionary game theory. Explaining the occurrence of low-yield pathways by an analytic optimization approach
S Schuster, LF de Figueiredo, A Schroeter, C Kaleta
Biosystems 105 (2), 147-153, 2011
502011
Selection of human tissue-specific elementary flux modes using gene expression data
A Rezola, J Pey, LF de Figueiredo, A Podhorski, S Schuster, A Rubio, ...
Bioinformatics 29 (16), 2009-2016, 2013
322013
Detecting and investigating substrate cycles in a genome‐scale human metabolic network
J Gebauer, S Schuster, LF de Figueiredo, C Kaleta
The FEBS journal 279 (17), 3192-3202, 2012
312012
CASOP GS: Computing intervention strategies targeted at production improvement in genome-scale metabolic networks
K Bohl, LF Figueiredo, O Hädicke, S Klamt, C Kost, S Schuster, C Kaleta
Gesellschaft für Informatik eV, 2010
242010
Genome‐scale metabolic representation of Amycolatopsis balhimycina
W Vongsangnak, LF Figueiredo, J Förster, T Weber, J Thykaer, ...
Biotechnology and bioengineering 109 (7), 1798-1807, 2012
192012
Detecting structural invariants in biological reaction networks
J Behre, LF de Figueiredo, S Schuster, C Kaleta
Bacterial Molecular Networks: Methods and Protocols, 377-407, 2012
142012
Response to comment on ‘Can sugars be produced from fatty acids? A test case for pathway analysis tools’
LF de Figueiredo, S Schuster, C Kaleta, DA Fell
Bioinformatics 25 (24), 3330-3331, 2009
102009
Predicting novel pathways in genome-scale metabolic networks
S Schuster, LF de Figueiredo, C Kaleta
Biochemical Society Transactions 38 (part 5), 1202-1205, 2010
82010
The system can't perform the operation now. Try again later.
Articles 1–20