Follow
Chaya D. Stern
Chaya D. Stern
Computational Chemist, DeepCure Inc
Verified email at deepcure.ai
Title
Cited by
Cited by
Year
OpenMM 7: Rapid development of high performance algorithms for molecular dynamics
P Eastman, J Swails, JD Chodera, RT McGibbon, Y Zhao, KA Beauchamp, ...
PLoS computational biology 13 (7), e1005659, 2017
10782017
Direct evidence for the adaptive role of copy number variation on antifolate susceptibility in Plasmodium falciparum
A Heinberg, E Siu, C Stern, EA Lawrence, MT Ferdig, KW Deitsch, ...
Molecular microbiology 88 (4), 702-712, 2013
612013
Development and Benchmarking of Open Force Field v1. 0.0—the Parsley Small-Molecule Force Field
Y Qiu, DGA Smith, S Boothroyd, H Jang, DF Hahn, J Wagner, CC Bannan, ...
Journal of chemical theory and computation 17 (10), 6262-6280, 2021
482021
PLoS Comput. Biol. 13, e1005659 (2017)
P Eastman, J Swails, JD Chodera, RT McGibbon, Y Zhao, KA Beauchamp, ...
25
Driving torsion scans with wavefront propagation
Y Qiu, DGA Smith, CD Stern, M Feng, H Jang, LP Wang
The Journal of Chemical Physics 152 (24), 244116, 2020
202020
Graph Nets for Partial Charge Prediction
Y Wang, J Fass, CD Stern, K Luo, J Chodera
arXiv preprint arXiv:1909.07903, 2019
82019
Capturing non-local through-bond effects when fragmenting molecules for quantum chemical torsion scans
CD Stern, CI Bayly, DGA Smith, J Fass, LP Wang, DL Mobley, ...
bioRxiv, 2020
6*2020
OpenMM 7: Rapid development of high performance algorithms for molecular dynamics. 13 (7): e1005659
P Eastman, J Swails, JD Chodera, RT McGibbon, Y Zhao, KA Beauchamp, ...
URL: https://journals. plos. org/ploscompbiol/article, 0
2
Capturing non-local through-bond effects in molecular mechanics force fields: II. Using fractional bond orders to fit torsion parameters
CD Stern, J Maat, DL Dotson, CI Bayly, DGA Smith, DL Mobley, ...
bioRxiv, 2022
12022
Improving Molecular Mechanics Force Fields via Capturing Non-Local Quantum Effects and Quantifying Parametric Uncertainties
CD Stern
Weill Medical College of Cornell University, 2020
2020
Is the Force with us? Automating generalizable torsions
C Stern, D Smith, C Bayly, J Chodera
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
Bridging the Gap between Computation and Experiments in GPCRs
CD Stern, JM Perez-Aguilar, SC Blanchard, H Weinstein, JD Chodera
Biophysical Journal 110 (3), 324a-325a, 2016
2016
The system can't perform the operation now. Try again later.
Articles 1–12