GeneWeaver: a web-based system for integrative functional genomics EJ Baker, JJ Jay, JA Bubier, MA Langston, EJ Chesler Nucleic acids research 40 (D1), D1067-D1076, 2012 | 138 | 2012 |
Lollipops in the clinic: information dense mutation plots for precision medicine JJ Jay, C Brouwer PloS one 11 (8), e0160519, 2016 | 122 | 2016 |
High‐precision genetic mapping of behavioral traits in the diversity outbred mouse population RW Logan, RF Robledo, JM Recla, VM Philip, JA Bubier, JJ Jay, ... Genes, Brain and Behavior 12 (4), 424-437, 2013 | 114 | 2013 |
A consensus map in cultivated hexaploid oat reveals conserved grass synteny with substantial subgenome rearrangement AS Chaffin, YF Huang, S Smith, WA Bekele, E Babiker, BN Gnanesh, ... The plant genome 9 (2), plantgenome2015.10.0102, 2016 | 113* | 2016 |
A systematic comparison of genome scale clustering algorithms JJ Jay, JD Eblen, Y Zhang, M Benson, AD Perkins, AM Saxton, BH Voy, ... Bioinformatics Research and Applications 13, 416-427, 2012 | 72 | 2012 |
Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species PJ Maughan, R Lee, R Walstead, RJ Vickerstaff, MC Fogarty, CR Brouwer, ... Bmc Biology 17, 1-19, 2019 | 67 | 2019 |
Ontological discovery environment: a system for integrating gene–phenotype associations EJ Baker, JJ Jay, VM Philip, Y Zhang, Z Li, R Kirova, MA Langston, ... Genomics 94 (6), 377-387, 2009 | 43 | 2009 |
EchinoDB, an application for comparative transcriptomics of deeply-sampled clades of echinoderms DA Janies, Z Witter, GV Linchangco, DW Foltz, AK Miller, AM Kerr, J Jay, ... BMC bioinformatics 17, 1-6, 2016 | 28 | 2016 |
Identification of a QTL in Mus musculus for Alcohol Preference, Withdrawal, and Ap3m2 Expression Using Integrative Functional Genomics and Precision Genetics JA Bubier, JJ Jay, CL Baker, SE Bergeson, H Ohno, P Metten, JC Crabbe, ... Genetics 197 (4), 1377-1393, 2014 | 22 | 2014 |
Autism candidate genes via mouse phenomics TF Meehan, CJ Carr, JJ Jay, CJ Bult, EJ Chesler, JA Blake Journal of Biomedical Informatics 44, S5-S11, 2011 | 20 | 2011 |
Cross-species integrative functional genomics in GeneWeaver reveals a role for Pafah1b1 in altered response to alcohol JA Bubier, TD Wilcox, JJ Jay, MA Langston, EJ Baker, EJ Chesler Frontiers in behavioral neuroscience 10, 1, 2016 | 8 | 2016 |
Cross species integration of functional genomics experiments JJ Jay International review of neurobiology 104, 1-24, 2012 | 8 | 2012 |
Performing integrative functional genomics analysis in GeneWeaver. org JJ Jay, EJ Chesler Gene Function Analysis, 13-29, 2014 | 6 | 2014 |
Connecting nutrition composition measures to biomedical research JJ Jay, A Sanders, RW Reid, CR Brouwer BMC research notes 11 (1), 883, 2018 | 4 | 2018 |
The Aliment to Bodily Condition knowledgebase (ABCkb): a database connecting plants and human health A Trautman, R Linchangco, R Walstead, JJ Jay, C Brouwer BMC Research Notes 14 (1), 433, 2021 | 3 | 2021 |
Automated gene data integration with Databio RW Reid, JW Ferrier, JJ Jay BMC Research Notes 13, 1-5, 2020 | 3 | 2020 |
On Bipartite Graph Decomposition in the Presence of Noise, with Applications to Biological Data Clustering. CA Phillips, JJ Jay, EJ Baker, EJ Chesler, MA Langston CTW, 215-219, 2012 | 1 | 2012 |
Linking Nutrition and Molecular Biology Using Data Mining and Graph Theory R Linchangco, JJ Jay, C Brouwer The FASEB Journal 31, lb134-lb134, 2017 | | 2017 |
Cross-Species Integration of Heterogeneous Functional Genomics Data with Literature-Based Gene Associations in GeneWeaver.org Reveals a Role for Celf4 JA Bubier, WN Frankel, RM Boumil, JJ Jay, EJ Baker, EJ Chesler Alcoholism: Clinical and Experimental Research 40, 193A, 2016 | | 2016 |
Cross-Species Integrative Functional Genomics using Geneweaver Reveals a Role for Pafah1b1 in Alcohol Response and Preference J Bubier, J Jay, M Langston, E Baker, E Chesler Alcoholism: Clinical and Experimental Research 38, 2014 | | 2014 |