| A draft human pangenome reference WW Liao, M Asri, J Ebler, D Doerr, M Haukness, G Hickey, S Lu, JK Lucas, ... Nature 617 (7960), 312-324, 2023 | 300 | 2023 |
| Critical assessment of metagenome interpretation: the second round of challenges F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ... Nature methods 19 (4), 429-440, 2022 | 189 | 2022 |
| Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads D Porubsky, P Ebert, PA Audano, MR Vollger, WT Harvey, P Marijon, ... Nature biotechnology 39 (3), 302-308, 2021 | 136 | 2021 |
| yacrd and fpa: upstream tools for long-read genome assembly P Marijon, R Chikhi, JS Varré Bioinformatics 36 (12), 3894-3896, 2020 | 44 | 2020 |
| Gaps and complex structurally variant loci in phased genome assemblies D Porubsky, MR Vollger, WT Harvey, AN Rozanski, P Ebert, G Hickey, ... Genome research 33 (4), 496-510, 2023 | 17 | 2023 |
| The K-mer File Format: a standardized and compact disk representation of sets of k-mers Y Dufresne, T Lemane, P Marijon, P Peterlongo, A Rahman, M Kokot, ... Bioinformatics 38 (18), 4423-4425, 2022 | 10 | 2022 |
| Graph analysis of fragmented long-read bacterial genome assemblies P Marijon, R Chikhi, JS Varré Bioinformatics 35 (21), 4239-4246, 2019 | 9 | 2019 |
| Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome HJ Lee, SU Greer, DS Pavlichin, B Zhou, AE Urban, T Weissman, ... Cell Reports Methods 3 (8), 2023 | 2 | 2023 |
| A Graph-Theoretic Barcode Ordering Model for Linked-Reads Y Dufresne, C Sun, P Marijon, D Lavenier, C Chauve, R Chikhi WABI 2020-20th Workshop on Algorithms in Bioinformatics, 11-12, 2020 | 2 | 2020 |
| Cutevariant: a standalone GUI-based desktop application to explore genetic variations from an annotated VCF file S Schutz, C Monod-Broca, L Bourneuf, P Marijon, T Montier Bioinformatics Advances 2 (1), vbab028, 2022 | 1 | 2022 |
| Cutevariant: a GUI-based desktop application to explore genetics variations S Schutz, P Marijon, T Montier, E Genin bioRxiv, 2021.02. 10.430619, 2021 | | 2021 |
| Ecole Doctorale SPI P Marijon Inria Rennes, 2019 | | 2019 |
| Novel components at the periphery of long read genome assembly tools P Marijon University of Lille, 2019 | | 2019 |
| Debugging long-read genome and metagenome assemblies using string graph analysis P Marijon, JS Varré, R Chikhi JOBIM 2017-Journées Ouvertes en Biologie, Informatique et Mathématiques, 2017 | | 2017 |
| Publications scientifiques de l'Institut de Recherche en Informatique et Systèmes Aléatoires (IRISA) Y Dufresne, T Lemane, P Marijon, P Peterlongo, A Rahman | | |
| Dream Comes True P Marijon, P Spohr, A Limasset | | |
| Investigation of differences between long read overlappers P Marijon, R Chikhi, JS Varré Identification de marques épigénétiques marqueurs de prédisposition aux …, 0 | | |
Rayan ChikhiInstitut Pasteur & CNRSVerified email at ens-cachan.org
