Guillaume Jospin
Guillaume Jospin
Bioinformatics engineer, University of California at Davis
Bestätigte E-Mail-Adresse bei ucdavis.edu
Titel
Zitiert von
Zitiert von
Jahr
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data
D Coil, G Jospin, AE Darling
Bioinformatics 31 (4), 587-589, 2015
6212015
PhyloSift: phylogenetic analysis of genomes and metagenomes
AE Darling, G Jospin, E Lowe, FA Matsen IV, HM Bik, JA Eisen
PeerJ 2, e243, 2014
4442014
Systematic identification of gene families for use as “markers” for phylogenetic and phylogeny-driven ecological studies of bacteria and archaea and their major subgroups
D Wu, G Jospin, JA Eisen
PloS one 8 (10), e77033, 2013
1472013
Global marine bacterial diversity peaks at high latitudes in winter
J Ladau, TJ Sharpton, MM Finucane, G Jospin, SW Kembel, J O'dwyer, ...
The ISME journal 7 (9), 1669-1677, 2013
1402013
PhyloSift: phylogenetic analysis of genomes and metagenomes. PeerJ 2: e243
AE Darling, G Jospin, E Lowe, FA Matsen, HM Bik, JA Eisen
842014
Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota
A Van Deynze, P Zamora, PM Delaux, C Heitmann, D Jayaraman, ...
PLoS biology 16 (8), e2006352, 2018
752018
Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation
PM Rosado, DCA Leite, GAS Duarte, RM Chaloub, G Jospin, ...
The ISME journal 13 (4), 921-936, 2019
592019
The bacterial communities of Drosophila suzukii collected from undamaged cherries
JA Chandler, PM James, G Jospin, JM Lang
PeerJ 2, e474, 2014
492014
Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia
LMO Loohuis, S Mangul, APS Ori, G Jospin, D Koslicki, HT Yang, T Wu, ...
Translational psychiatry 8 (1), 1-9, 2018
37*2018
Swabs to genomes: a comprehensive workflow
MI Dunitz, JM Lang, G Jospin, AE Darling, JA Eisen, DA Coil
PeerJ 3, e960, 2015
322015
Recent outbreaks of shigellosis in California caused by two distinct populations of Shigella sonnei with either increased virulence or fluoroquinolone resistance
VK Kozyreva, G Jospin, AL Greninger, JP Watt, JA Eisen, V Chaturvedi
Msphere 1 (6), 2016
272016
Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource
TJ Sharpton, G Jospin, D Wu, MGI Langille, KS Pollard, JA Eisen
BMC bioinformatics 13 (1), 1-12, 2012
252012
Sifting through genomes with iterative-sequence clustering produces a large, phylogenetically diverse protein-family resource
TJ Sharpton, G Jospin, D Wu, MGI Langille, KS Pollard, JA Eisen
BMC bioinformatics 13 (1), 1-12, 2012
252012
Whole genome sequencing of extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from a patient in Lebanon
S Tokajian, JA Eisen, G Jospin, A Farra, DA Coil
Frontiers in cellular and infection microbiology 5, 32, 2015
232015
Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia
LGE Wilkins, CL Ettinger, G Jospin, JA Eisen
Scientific reports 9 (1), 1-15, 2019
22*2019
4th, Bik HM, Eisen JA
AE Darling, G Jospin, E Lowe, FA Matsen
PhyloSift: phylogenetic analysis of genomes and metagenomes. PeerJ 2, e243, 2014
192014
Genome Analysis of Streptococcus pyogenes Associated with Pharyngitis and Skin Infections
J Ibrahim, JA Eisen, G Jospin, DA Coil, G Khazen, S Tokajian
PLoS One 11 (12), e0168177, 2016
142016
Draft genome sequences of 26 Porphyromonas strains isolated from the canine oral microbiome
DA Coil, A Alexiev, C Wallis, C O’Flynn, O Deusch, I Davis, A Horsfall, ...
Genome announcements 3 (2), 2015
92015
Draft genome sequences of Streptococcus pyogenes strains associated with throat and skin infections in Lebanon
S Tokajian, JA Eisen, G Jospin, DA Coil
Genome announcements 2 (3), 2014
72014
Genomic attributes of extended-spectrum β-lactamase-producing Escherichia coli isolated from patients in Lebanon
S Tokajian, T Salloum, JA Eisen, G Jospin, A Farra, JE Mokhbat, DA Coil
Future Microbiology 12 (3), 213-226, 2017
62017
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