| SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence H Lopez-Maestre, L Brinza, C Marchet, J Kielbassa, S Bastien, ... Nucleic Acids Research 44 (19), e148-e148, 2016 | 93 | 2016 |
| TGFβ/BMP immune signaling affects abundance and function of C. elegans gut commensals M Berg, D Monnin, J Cho, L Nelson, A Crits-Christoph, M Shapira Nature communications 10 (1), 604, 2019 | 71 | 2019 |
| Parallel evolution in the integration of a co-obligate aphid symbiosis D Monnin, R Jackson, ET Kiers, M Bunker, J Ellers, LM Henry Current Biology 30 (10), 1949-1957. e6, 2020 | 59 | 2020 |
| The oxidative environment: a mediator of interspecies communication that drives symbiosis evolution Y Moné, D Monnin, N Kremer Proceedings of the Royal Society B: Biological Sciences 281 (1785), 20133112, 2014 | 51 | 2014 |
| Convergent evolution of a labile nutritional symbiosis in ants R Jackson, D Monnin, PA Patapiou, G Golding, H Helanterä, J Oettler, ... The ISME Journal 16 (9), 2114-2122, 2022 | 17 | 2022 |
| Influence of oxidative homeostasis on bacterial density and cost of infection in Drosophila–Wolbachia symbioses D Monnin, N Kremer, C Berny, H Henri, A Dumet, Y Voituron, ... Journal of Evolutionary Biology 29 (6), 1211-1222, 2016 | 13 | 2016 |
| Local adaptation to hosts and parasitoids shape Hamiltonella defensa genotypes across aphid species T Wu, D Monnin, RAR Lee, LM Henry Proceedings of the Royal Society B 289 (1985), 20221269, 2022 | 12 | 2022 |
| Experimental evolution of virulence and associated traits in a Drosophila melanogaster–Wolbachia symbiosis D Monnin, N Kremer, C Michaud, M Villa, H Henri, E Desouhant, F Vavre Peer Community Journal 1, 2021 | 6 | 2021 |
| Convergent evolution of a nutritional symbiosis in ants R Jackson, D Monnin, PA Patapiou, G Golding, H Helanterä, J Oettler, ... | 4 | 2021 |
| Impact of Wolbachia on oxidative stress sensitivity in the parasitic wasp Asobara japonica D Monnin, N Kremer, E Desouhant, F Vavre Plos one 12 (4), e0175974, 2017 | 3 | 2017 |
| De novo identification, differential analysis and functional annotation of SNPs from RNA-seq data in non-model species H Lopez Maestre, L Brinza, C Marchet, J Kielbassa, S Bastien, M Boutigny, ... bioRxiv, 035238, 2015 | 1 | 2015 |
| Peer Community Journal D Monnin, N Kremer, C Michaud, M Villa, H Henri, E Desouhant, F Vavre | | 2021 |
| Temperature effects on virulence evolution of wMelPop Wolbachia in Drosophila melanogaster D Monnin, N Kremer, C Michaud, M Villa, H Henri Evolutionary Biology, 26.062265, 2020 | | 2020 |
| Évolution de la dépendance et homéostasie oxydative dans les symbioses insecte/Wolbachia D Monnin Université de Lyon, 2016 | | 2016 |
| De novo identification, differential analysis and functional annotation of SNPs from RNA-seq data in non-model species L Brinza, C Marchet, J Kielbassa, S Bastien, M Boutigny, D Monnin, ... | | 2015 |
