Rob Edwards

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Forest RohwerSan Diego State UniversityVerified email at mail.sdsu.edu
Liz DinsdaleMatthew Flinders Fellow of Marine Biology, Professor, Flinders University, South AustraliaVerified email at flinders.edu.au
Robert SchmiederSan Diego State UniversityVerified email at sciences.sdsu.edu
Bas E. DutilhMicroverse Cluster, Friedrich Schiller University Jena | Theoretical Biology and BioinformaticsVerified email at uni-jena.de
Rick StevensProfessor of Computer Science, University of ChicagoVerified email at ci.uchicago.edu
Robert OlsonArgonne National LaboratoryVerified email at mcs.anl.gov
linda wegley kellyScripps Institution of Oceanography - UCSDVerified email at ucsd.edu
Genivaldo Gueiros Z. SilvaSan Diego State UniversityVerified email at rohan.sdsu.edu
Mya BreitbartUniversity of South FloridaVerified email at marine.usf.edu
Katelyn McNairResearch Associate, San Diego State UniversityVerified email at mail.sdsu.edu
Florent E AnglyGenomic data analyst, The University of QueenslandVerified email at uq.edu.au
Veronika VonsteinFellowship for Interpretation of GenomesVerified email at theFIG.info
Gary J. OlsenProfessor of Microbiology, University of Illinois at Urbana-ChampaignVerified email at life.uiuc.edu
Fabiano ThompsonFederal University of Rio de Janeiro (UFRJ)Verified email at biologia.ufrj.br
Peter SalamonProfessor of Mathematics, San Diego State UniversityVerified email at sdsu.edu
Gordon D PuschFellowship for Interpretation of GenomesVerified email at xnet.com
Ramy K. AzizProfessor of Microbiology & Immunology, CCHE 57357 & Faculty of Pharmacy, Cairo UniversityVerified email at pharma.cu.edu.eg
Yan Wei LimSan Diego State University, San Diego, CAVerified email at rohan.sdsu.edu
Stanley MaloySan Diego State UniversityVerified email at sdsu.edu
Fangfang XiaScientist, Argonne National LaboratoryVerified email at anl.gov

Rob Edwards

Matthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, Australia

Verified email at flinders.edu.au - Homepage

Metagenomics Microbial Genomics Bioinformatics Data Analysis


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
The RAST Server: rapid annotations using subsystems technology R Aziz, D Bartels, A Best, M DeJongh, T Disz, R Edwards, K Formsma, ... BMC genomics 9 (1), 75, 2008	9042	2008
Quality control and preprocessing of metagenomic datasets R Schmieder, R Edwards Bioinformatics 27 (6), 863, 2011	3641	2011
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ... BMC bioinformatics 9 (1), 386, 2008	3379	2008
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST) R Overbeek, R Olson, GD Pusch, GJ Olsen, JJ Davis, T Disz, RA Edwards, ... Nucleic acids research 42 (D1), D206-D214, 2014	3079	2014
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005	1981	2005
Community genomics among stratified microbial assemblages in the ocean's interior EF DeLong, CM Preston, T Mincer, V Rich, SJ Hallam, NU Frigaard, ... Science 311 (5760), 496-503, 2006	1382	2006
The minimum information about a genome sequence (MIGS) specification D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ... Nature biotechnology 26 (5), 541-547, 2008	1215	2008
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes T Brettin, JJ Davis, T Disz, RA Edwards, S Gerdes, GJ Olsen, R Olson, ... Scientific reports 5 (1), 1-6, 2015	1204	2015
The marine viromes of four oceanic regions FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ... PLoS biology 4 (11), e368, 2006	1039	2006
Functional metagenomic profiling of nine biomes EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ... Nature 452 (7187), 629-632, 2008	995	2008
Viral metagenomics RA Edwards, F Rohwer Nature Reviews Microbiology 3 (6), 504-510, 2005	967	2005
Nitrogen control in bacteria MJ Merrick, RA Edwards Microbiological reviews 59 (4), 604-622, 1995	820	1995
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases JM Brulc, DA Antonopoulos, MEB Miller, MK Wilson, AC Yannarell, ... Proceedings of the National Academy of Sciences 106 (6), 1948-1953, 2009	706	2009
The Phage Proteomic Tree: a genome-based taxonomy for phage F Rohwer, R Edwards Journal of bacteriology 184 (16), 4529-4535, 2002	668	2002
Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets R Schmieder, R Edwards PLoS One 6 (3), e17288, 2011	625	2011
Using pyrosequencing to shed light on deep mine microbial ecology R Edwards, B Rodriguez-Brito, L Wegley, M Haynes, M Breitbart, ... BMC genomics 7 (1), 57, 2006	599	2006
Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil N Fierer, M Breitbart, J Nulton, P Salamon, C Lozupone, R Jones, ... Applied and Environmental Microbiology 73 (21), 7059-7066, 2007	587	2007
Metagenomic analysis of stressed coral holobionts RV Thurber, D Willner‐Hall, B Rodriguez‐Mueller, C Desnues, ... Environmental microbiology 11 (8), 2148-2163, 2009	567	2009
Improved allelic exchange vectors and their use to analyze 987P fimbria gene expression RA Edwards, LH Keller, DM Schifferli Gene 207 (2), 149-157, 1998	560	1998
Metagenomic analysis of the microbial community associated with the coral Porites astreoides L Wegley, R Edwards, B Rodriguez‐Brito, H Liu, F Rohwer Environmental microbiology 9 (11), 2707-2719, 2007	542	2007

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