| Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0 PC Carvalho, DB Lima, FV Leprevost, MDM Santos, JSG Fischer, ... Nature protocols 11 (1), 102-117, 2016 | 251 | 2016 |
| Simple, efficient and thorough shotgun proteomic analysis with PatternLab V MDM Santos, DB Lima, JSG Fischer, MA Clasen, LU Kurt, ... Nature Protocols 17 (7), 1553-1578, 2022 | 33 | 2022 |
| Platelet proteome reveals features of cell death, antiviral response and viral replication in covid-19 MRO Trugilho, IG Azevedo-Quintanilha, JSM Gesto, ECS Moraes, ... Cell Death Discovery 8 (1), 324, 2022 | 17 | 2022 |
| Comparing intestinal versus diffuse gastric cancer using a PEFF-oriented proteomic pipeline HH Wippel, MDM Santos, MA Clasen, LU Kurt, FCS Nogueira, ... Journal of proteomics 171, 63-72, 2018 | 15 | 2018 |
| The ribosome assembly factor Nop53 controls association of the RNA exosome with pre-60S particles in yeast LPP Cepeda, FFM Bagatelli, RM Santos, MDM Santos, FCS Nogueira, ... Journal of Biological Chemistry 294 (50), 19365-19380, 2019 | 13 | 2019 |
| A scoring model for phosphopeptide site localization and its impact on the question of whether to use MSA JSG Fischer, MDM dos Santos, FK Marchini, VC Barbosa, PC Carvalho, ... Journal of proteomics 129, 42-50, 2015 | 12 | 2015 |
| RawVegetable–A data assessment tool for proteomics and cross-linking mass spectrometry experiments LU Kurt, MA Clasen, MDM Santos, TACB Souza, EC Andreassa, EB Lyra, ... Journal of Proteomics 225, 103864, 2020 | 11 | 2020 |
| Mixed-Data Acquisition: Next-Generation Quantitative Proteomics Data Acquisition MDM Santos, AC Camillo-Andrade, LU Kurt, MA Clasen, E Lyra, ... Journal of proteomics 222, 103803, 2020 | 11 | 2020 |
| Proteomics pinpoints alterations in grade I meningiomas of male versus female patients JM Silva, HH Wippel, MDM Santos, DCA Verissimo, RM Santos, ... Scientific Reports 10 (1), 10335, 2020 | 10 | 2020 |
| Assessing the partners of the RBP9-mRNP complex in Trypanosoma cruzi using shotgun proteomics and RNA-seq HH Wippel, AH Inoue, NM Vidal, JF Costa, BH Marcon, BAA Romagnoli, ... RNA biology 15 (8), 1106-1118, 2018 | 9 | 2018 |
| Dynamic molecular events associated to Plasmodium berghei gametogenesis through proteomic approach CHS GARCIA, D DEPOIX, RML QUEIROZ, JMF SOUZA, W FONTES, ... Journal of Proteomics, 2017 | 9 | 2017 |
| DiagnoProt: a tool for discovery of new molecules by mass spectrometry ARF Silva, DB Lima, A Leyva, R Duran, C Batthyany, PF Aquino, JC Leal, ... Bioinformatics 33 (12), 1883-1885, 2017 | 9 | 2017 |
| Crosstalk between Hedgehog pathway and energy pathways in human adipose-derived stem cells: A deep sequencing analysis of polysome-associated RNA P Shigunov, LT Balvedi, MDM Santos, RH Herai, AM Aguiar, ... Scientific Reports 8 (1), 8411, 2018 | 7 | 2018 |
| Proteogenomic Analysis Reveals Proteins Involved in the First Step of Adipogenesis in Human Adipose-Derived Stem Cells B Bonilauri, AC Camillo-Andrade, MDM Santos, JSG Fischer, ... Stem Cells International 2021, 2021 | 6 | 2021 |
| The impact of blood-processing time on the proteome of human peripheral blood mononuclear cells B Bonilauri, MDM Santos, AC Camillo-Andrade, S Bispo, FCS Nogueira, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1869 (3), 140581, 2021 | 6 | 2021 |
| Characterizing protein conformers by cross-linking mass spectrometry and pattern recognition LU Kurt, MA Clasen, MDM Santos, ESB Lyra, LO Santos, CHI Ramos, ... Bioinformatics 37 (18), 3035-3037, 2021 | 5 | 2021 |
| Proteomics reveals that quinoa bioester promotes replenishing effects in epidermal tissue AC Camillo-Andrade, MDM Santos, JSG Fischer, BB Swinka, B Bosquetti, ... Scientific Reports 10 (1), 19392, 2020 | 5 | 2020 |
| Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra DB Lima, ARF Silva, M Dupré, MDM Santos, MA Clasen, LU Kurt, ... Bioinformatics, 2019 | 5 | 2019 |
| PatternLab V Handles Multiplex Spectra in Shotgun Proteomic Searches and Increases Identification MA Clasen, MDM Santos, LU Kurt, J Fischer, AC Camillo-Andrade, ... Journal of the American Society for Mass Spectrometry 34 (4), 794-796, 2023 | 4 | 2023 |
| DiagnoTop: A Computational Pipeline for Discriminating Bacterial Pathogens without Database Search D Borges Lima, M Dupré, MD Mariano Santos, PC Carvalho, ... Journal of the American Society for Mass Spectrometry 32 (6), 1295-1299, 2021 | 4 | 2021 |
Paulo Costa CarvalhoCarlos Chagas Institute, Fiocruz - Paraná, BrazilBestätigte E-Mail-Adresse bei pcarvalho.com
