Claire Lemaitre
Claire Lemaitre
Genscale, Inria Rennes Bretagne Atlantique
Verified email at inria.fr - Homepage
Title
Cited by
Cited by
Year
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
3972017
Critical assessment of metagenome interpretation—a benchmark of metagenomics software
A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ...
Nature methods 14 (11), 1063-1071, 2017
3972017
Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges
A Gouin, A Bretaudeau, K Nam, S Gimenez, JM Aury, B Duvic, F Hilliou, ...
Scientific reports 7 (1), 1-12, 2017
1352017
Reference-free detection of isolated SNPs
R Uricaru, G Rizk, V Lacroix, E Quillery, O Plantard, R Chikhi, C Lemaitre, ...
Nucleic acids research 43 (2), e11-e11, 2015
882015
Spodoptera frugiperda (Lepidoptera: Noctuidae) host-plant variants: two host strains or two distinct species?
P Dumas, F Legeai, C Lemaitre, E Scaon, M Orsucci, K Labadie, ...
Genetica 143 (3), 305-316, 2015
832015
Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph
G Benoit, C Lemaitre, D Lavenier, E Drezen, T Dayris, R Uricaru, G Rizk
BMC bioinformatics 16 (1), 1-14, 2015
822015
Footprints of inversions at present and past pseudoautosomal boundaries in human sex chromosomes
C Lemaitre, MDV Braga, C Gautier, MF Sagot, E Tannier, GAB Marais
Genome biology and evolution 1, 56-66, 2009
802009
Analysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation
C Lemaitre, L Zaghloul, MF Sagot, C Gautier, A Arneodo, E Tannier, ...
BMC genomics 10 (1), 1-12, 2009
742009
Multiple comparative metagenomics using multiset k-mer counting
G Benoit, P Peterlongo, M Mariadassou, E Drezen, S Schbath, D Lavenier, ...
PeerJ Computer Science 2, e94, 2016
712016
GATB: genome assembly & analysis tool box
E Drezen, G Rizk, R Chikhi, C Deltel, C Lemaitre, P Peterlongo, ...
Bioinformatics 30 (20), 2959-2961, 2014
692014
Compareads: comparing huge metagenomic experiments
N Maillet, C Lemaitre, R Chikhi, D Lavenier, P Peterlongo
BMC bioinformatics 13 (19), 1-10, 2012
642012
MindTheGap: integrated detection and assembly of short and long insertions
G Rizk, A Gouin, R Chikhi, C Lemaitre
Bioinformatics 30 (24), 3451-3457, 2014
542014
Precise detection of rearrangement breakpoints in mammalian chromosomes
C Lemaitre, E Tannier, C Gautier, MF Sagot
BMC bioinformatics 9 (1), 1-15, 2008
532008
Close 3D proximity of evolutionary breakpoints argues for the notion of spatial synteny
AS Véron, C Lemaitre, C Gautier, V Lacroix, MF Sagot
BMC genomics 12 (1), 1-13, 2011
432011
Cassis: detection of genomic rearrangement breakpoints
C Baudet, C Lemaitre, Z Dias, C Gautier, E Tannier, MF Sagot
Bioinformatics 26 (15), 1897-1898, 2010
342010
Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads
A Gouin, F Legeai, P Nouhaud, A Whibley, JC Simon, C Lemaitre
Heredity 114 (5), 494-501, 2015
312015
Disentangling the causes for faster-X evolution in aphids
J Jaquiéry, J Peccoud, T Ouisse, F Legeai, N Prunier-Leterme, A Gouin, ...
Genome biology and evolution 10 (2), 507-520, 2018
222018
DiscoSnp++: de novo detection of small variants from raw unassembled read set (s)
P Peterlongo, C Riou, E Drezen, C Lemaitre
BioRxiv, 209965, 2017
222017
Multi-scale characterization of symbiont diversity in the pea aphid complex through metagenomic approaches
C Guyomar, F Legeai, E Jousselin, C Mougel, C Lemaitre, JC Simon
Microbiome 6 (1), 1-21, 2018
182018
Identifying genomic hotspots of differentiation and candidate genes involved in the adaptive divergence of pea aphid host races
P Nouhaud, M Gautier, A Gouin, J Jaquiéry, J Peccoud, F Legeai, ...
Molecular ecology 27 (16), 3287-3300, 2018
182018
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