Manuel Holtgrewe
Manuel Holtgrewe
Core Unit Bioinformatics, Berlin Institute of Health
Bestätigte E-Mail-Adresse bei bihealth.de - Startseite
TitelZitiert vonJahr
Mason: a read simulator for second generation sequencing data
M Holtgrewe
1572010
RazerS 3: faster, fully sensitive read mapping
D Weese, M Holtgrewe, K Reinert
Bioinformatics 28 (20), 2592-2599, 2012
1122012
Next-generation diagnostics and disease-gene discovery with the Exomiser
D Smedley, JOB Jacobsen, M Jäger, S Köhler, M Holtgrewe, M Schubach, ...
Nature protocols 10 (12), 2004, 2015
1052015
Engineering a scalable high quality graph partitioner
M Holtgrewe, P Sanders, C Schulz
2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010
892010
A novel and well-defined benchmarking method for second generation read mapping
M Holtgrewe, AK Emde, D Weese, K Reinert
BMC bioinformatics 12 (1), 210, 2011
802011
Fiona: a parallel and automatic strategy for read error correction
MH Schulz, D Weese, M Holtgrewe, V Dimitrova, S Niu, K Reinert, ...
Bioinformatics 30 (17), i356-i363, 2014
602014
Genome alignment with graph data structures: a comparison
B Kehr, K Trappe, M Holtgrewe, K Reinert
BMC bioinformatics 15 (1), 99, 2014
312014
Simple and fast nearest neighbor search
M Birn, M Holtgrewe, P Sanders, J Singler
2010 Proceedings of the Twelfth Workshop on Algorithm Engineering and …, 2010
212010
Methods for the detection and assembly of novel sequence in high-throughput sequencing data
M Holtgrewe, L Kuchenbecker, K Reinert
Bioinformatics 31 (12), 1904-1912, 2015
122015
A scalable coarsening phase for a multi-level graph partitioning algorithm
M Holtgrewe, P Sanders
Master's thesis, University of Karlsruhe, 2009
52009
Pathogenic variants in USP7 cause a neurodevelopmental disorder with speech delays, altered behavior, and neurologic anomalies
MD Fountain, DS Oleson, ME Rech, L Segebrecht, JV Hunter, ...
Genetics in Medicine, 1, 2019
22019
Parallel Highway-Node Routing
M Holtgrewe
Student research project, Universität Karlsruhe (TH), 2008
22008
Multisite de novo mutations in human offspring after paternal exposure to ionizing radiation
M Holtgrewe, A Knaus, G Hildebrand, JT Pantel, MR de los Santos, ...
Scientific reports 8 (1), 14611, 2018
12018
Computational Exome and Genome Analysis
PN Robinson, RM Piro, M Jager
Chapman and Hall/CRC, 2017
12017
VCFPy: a Python 3 library with good support for both reading and writing VCF.
M Holtgrewe, D Beule
J. Open Source Software 1 (6), 85, 2016
12016
Paroxysmal tonic upgaze: A heterogeneous clinical condition responsive to carbonic anhydrase inhibition
A Quade, A Thiel, I Kurth, M Holtgrewe, M Elbracht, D Beule, ...
European Journal of Paediatric Neurology, 2019
2019
Digestiflow: from BCL to FASTQ with ease
M Holtgrewe, M Nieminen, C Messerschmidt, D Beule
PeerJ PrePrints 7, e27717v4, 2019
2019
Targeted panel sequencing in pediatric primary cardiomyopathy supports a critical role of TNNI3
J Kühnisch, C Herbst, N Al‐Wakeel‐Marquard, J Dartsch, M Holtgrewe, ...
Clinical Genetics, 2019
2019
AltamISA: a Python API for ISA-Tab files
M Kuhring, M Nieminen, J Kirwan, D Beule, M Holtgrewe
Journal of Open Source Software 4 (40), 1610, 2019
2019
SCelVis: Powerful explorative single cell data analysis on the desktop and in the cloud
B Obermayer, M Holtgrewe, M Nieminen, C Messerschmidt, D Beule
bioRxiv, 713008, 2019
2019
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