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Thawfeek Varusai
Thawfeek Varusai
Scientific data analyst, EMBL-EBI
Verified email at ebi.ac.uk - Homepage
Title
Cited by
Cited by
Year
The reactome pathway knowledgebase
A Fabregat, S Jupe, L Matthews, K Sidiropoulos, M Gillespie, P Garapati, ...
Nucleic acids research 46 (D1), D649-D655, 2018
30882018
The reactome pathway knowledgebase
B Jassal, L Matthews, G Viteri, C Gong, P Lorente, A Fabregat, ...
Nucleic acids research 48 (D1), D498-D503, 2020
24832020
The reactome pathway knowledgebase 2022
M Gillespie, B Jassal, R Stephan, M Milacic, K Rothfels, A Senff-Ribeiro, ...
Nucleic acids research 50 (D1), D687-D692, 2022
11142022
BioModels—15 years of sharing computational models in life science
RS Malik-Sheriff, M Glont, TVN Nguyen, K Tiwari, MG Roberts, A Xavier, ...
Nucleic acids research 48 (D1), D407-D415, 2020
3012020
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
802021
Toward community standards and software for whole-cell modeling
D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016
642016
The impact of mathematical modeling in understanding the mechanisms underlying neurodegeneration: evolving dimensions and future directions
A Lloret‐Villas, TM Varusai, N Juty, C Laibe, N Le Novere, H Hermjakob, ...
CPT: pharmacometrics & systems pharmacology 6 (2), 73-86, 2017
502017
Dynamic modelling of the mTOR signalling network reveals complex emergent behaviours conferred by DEPTOR
TM Varusai, LK Nguyen
Scientific reports 8 (1), 643, 2018
342018
Protein–protein interactions generate hidden feedback and feed-forward loops to trigger bistable switches, oscillations and biphasic dose–responses
TM Varusai, W Kolch, BN Kholodenko, LK Nguyen
Molecular BioSystems 11 (10), 2750-2762, 2015
332015
The reactome pathway knowledgebase 2024
M Milacic, D Beavers, P Conley, C Gong, M Gillespie, J Griss, R Haw, ...
Nucleic acids research 52 (D1), D672-D678, 2024
282024
Interleukins and their signaling pathways in the Reactome biological pathway database
S Jupe, K Ray, CD Roca, T Varusai, V Shamovsky, L Stein, P D'Eustachio, ...
Journal of Allergy and Clinical Immunology 141 (4), 1411-1416, 2018
142018
Reactome and ORCID—fine-grained credit attribution for community curation
G Viteri, L Matthews, T Varusai, M Gillespie, M Milacic, J Cook, J Weiser, ...
Database 2019, baz123, 2019
132019
Ubiquitin chain specific auto‐ubiquitination triggers sustained oscillation, bistable switches and excitable firing
LK Nguyen, Q Zhao, TM Varusai, BN Kholodenko
IET systems biology 8 (6), 282-292, 2014
102014
Using Reactome to build an autophagy mechanism knowledgebase
TM Varusai, S Jupe, C Sevilla, L Matthews, M Gillespie, L Stein, G Wu, ...
Autophagy 17 (6), 1543-1554, 2021
72021
SARS-CoV-2 desensitizes host cells to interferon through inhibition of the JAK-STAT pathway (preprint)
DY Chen, N Khan, BJ Close, RK Goel, B Blum, AH Tavares, D Kenney, ...
2020
Ethacridine inhibits SARS-CoV-2 by inactivating viral particles in cellular models (preprint)
X Li, P Lidsky, Y Xiao, CT Wu, M Garcia-Knight, J Yang, T Nakayama, ...
2020
Mechanism of SARS-CoV-2 polymerase inhibition by remdesivir (preprint)
G Kokic, HS Hillen, D Tegunov, C Dienemann, F Seitz, J Schmitzova, ...
2020
COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms (preprint)
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
2020
Induced pulmonary comorbidities render CD-1 mice sensitive to SARS-CoV-2 (preprint)
R Falach, L Bar-On, S Lazar, T Kadar, O Mazor, M Aftalion, D Gur, ...
2020
A genome-wide CRISPR/Cas9 knock-out screen identifies the DEAD box RNA helicase DDX42 as a broad antiviral inhibitor (preprint)
B Bonaventure, A Rebendenne, FG de Gracia, M Tauziet, J McKellar, ...
2020
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