Secondary structure propensities in peptide folding simulations: a systematic comparison of molecular mechanics interaction schemes D Matthes, BL De Groot Biophysical journal 97 (2), 599-608, 2009 | 145 | 2009 |
Driving forces and structural determinants of steric zipper peptide oligomer formation elucidated by atomistic simulations D Matthes, V Gapsys, BL de Groot Journal of molecular biology 421 (2-3), 390-416, 2012 | 77 | 2012 |
Mapping the conformational dynamics and pathways of spontaneous steric zipper peptide oligomerization D Matthes, V Gapsys, V Daebel, BL de Groot PloS one 6 (5), e19129, 2011 | 55 | 2011 |
Primary steps of pH‐dependent insulin aggregation kinetics are governed by conformational flexibility J Haas, E Vöhringer‐Martinez, A Bögehold, D Matthes, U Hensen, ... ChemBioChem 10 (11), 1816-1822, 2009 | 51 | 2009 |
The 3D structure of lipidic fibrils of α-synuclein B Frieg, L Antonschmidt, C Dienemann, JA Geraets, EE Najbauer, ... Nature communications 13 (1), 6810, 2022 | 36 | 2022 |
An atomistic view of amyloidogenic self-assembly: structure and dynamics of heterogeneous conformational states in the pre-nucleation phase D Matthes, V Gapsys, JT Brennecke, BL de Groot Scientific Reports 6 (1), 33156, 2016 | 32 | 2016 |
Resolving the atomistic modes of Anle138b inhibitory action on peptide oligomer formation D Matthes, V Gapsys, C Griesinger, BL de Groot ACS chemical neuroscience 8 (12), 2791-2808, 2017 | 27 | 2017 |
Spontaneous aggregation of the insulin-derived steric zipper peptide VEALYL results in different aggregation forms with common features D Matthes, V Daebel, K Meyenberg, D Riedel, G Heim, U Diederichsen, ... Journal of Molecular Biology 426 (2), 362-376, 2014 | 26 | 2014 |
The clinical drug candidate anle138b binds in a cavity of lipidic α-synuclein fibrils L Antonschmidt, D Matthes, R Dervişoğlu, B Frieg, C Dienemann, ... Nature Communications 13 (1), 5385, 2022 | 19 | 2022 |
Molecular dynamics simulations reveal the importance of amyloid-beta oligomer β-sheet edge conformations in membrane permeabilization D Matthes, BL de Groot Journal of Biological Chemistry 299 (4), 2023 | 8 | 2023 |