Charlotta Scharfe
Charlotta Scharfe
Graduate Student in Bioinformatics, University of Tubingen
Verified email at informatik.uni-tuebingen.de
Title
Cited by
Cited by
Year
Sequence co-evolution gives 3D contacts and structures of protein complexes
TA Hopf, CPI Schärfe, JP Rodrigues, AG Green, O Kohlbacher, C Sander, ...
Elife 3, e03430, 2014
3112014
Mutation effects predicted from sequence co-variation
TA Hopf, JB Ingraham, FJ Poelwijk, CPI Schärfe, M Springer, C Sander, ...
Nature biotechnology 35 (2), 128-135, 2017
1932017
The MoSGrid science gateway–a complete solution for molecular simulations
J Krüger, R Grunzke, S Gesing, S Breuers, A Brinkmann, L de la Garza, ...
Journal of Chemical Theory and Computation 10 (6), 2232-2245, 2014
702014
Activation of lymphoma-associated MyD88 mutations via allostery-induced TIR-domain oligomerization
M Avbelj, OO Wolz, O Fekonja, M Benčina, M Repič, J Mavri, J Krüger, ...
Blood 124 (26), 3896-3904, 2014
512014
Structure and sequence analyses of clustered protocadherins reveal antiparallel interactions that mediate homophilic specificity
JM Nicoludis, SY Lau, CPI Schärfe, DS Marks, WA Weihofen, R Gaudet
Structure 23 (11), 2087-2098, 2015
482015
Structural and functional characterization of the bacterial type III secretion export apparatus
T Dietsche, M Tesfazgi Mebrhatu, MJ Brunner, P Abrusci, J Yan, ...
PLoS pathogens 12 (12), e1006071, 2016
422016
Genetic variation in human drug-related genes
CPI Schärfe, R Tremmel, M Schwab, O Kohlbacher, DS Marks
Genome medicine 9 (1), 117, 2017
342017
Antiparallel protocadherin homodimers use distinct affinity-and specificity-mediating regions in cadherin repeats 1-4
JM Nicoludis, BE Vogt, AG Green, CPI Schärfe, DS Marks, R Gaudet
Elife 5, e18449, 2016
312016
Standards‐based metadata management for molecular simulations
R Grunzke, S Breuers, S Gesing, S Herres‐Pawlis, M Kruse, D Blunk, ...
Concurrency and Computation: Practice and Experience 26 (10), 1744-1759, 2014
262014
The EVcouplings Python framework for coevolutionary sequence analysis
TA Hopf, AG Green, B Schubert, S Mersmann, CPI Schärfe, JB Ingraham, ...
Bioinformatics 35 (9), 1582-1584, 2019
192019
From the Desktop to the Grid: conversion of KNIME Workflows to gUSE.
L de la Garza, J Krüger, C Schärfe, M Röttig, S Aiche, K Reinert, ...
IWSG, 2013
112013
Structure, dynamics and implied gating mechanism of a human cyclic nucleotide-gated channel
Y Gofman, C Schärfe, DS Marks, T Haliloglu, N Ben-Tal
PLoS Comput Biol 10 (12), e1003976, 2014
92014
Population-specific design of de-immunized protein biotherapeutics
B Schubert, C Schärfe, P Dönnes, T Hopf, D Marks, O Kohlbacher
PLoS computational biology 14 (3), e1005983, 2018
72018
Ballaxy: web services for structural bioinformatics
AK Hildebrandt, D Stöckel, NM Fischer, L de la Garza, J Krüger, S Nickels, ...
Bioinformatics 31 (1), 121-122, 2015
72015
Sequence co-evolution gives 3D contacts and structures of protein complexes. eLife 3
TA Hopf, CPI Schärfe, J Rodrigues, AG Green, O Kohlbacher, C Sander, ...
72014
ClinVAP: a reporting strategy from variants to therapeutic options
B Sürün, CPI Schärfe, MR Divine, J Heinrich, NC Toussaint, ...
Bioinformatics 36 (7), 2316-2317, 2020
2020
Molecular epidemiology as an effective tool for the diagnosis and control of PRRSV infections in pig farms, illustrated using five cases
T Frey, A Richter, J Skrypski, C Schaerfe, M Hoferer
BERLINER UND MUNCHENER TIERARZTLICHE WOCHENSCHRIFT 130 (7-8), 323-331, 2017
2017
Development of a pharmacorphore model for pharmacological chaperones targeting mutant trafficking-deficient CNG channels
CPI Schärfe, J Taeger, P Reuter, NM Fischer, J Krüger, B Wissinger, ...
Journal of Cheminformatics 5 (1), 1-2, 2013
2013
A Critical Assessment of the Impact of Computational Methods on the Productivity in Pharmaceutical Research and Development
C Schärfe
2011
Competing interests statement
JM Nicoludis, BE Vogt, AG Green, CPI Schärfe, DS Marks, R Gaudet
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Articles 1–20