| Transcription factors: from enhancer binding to developmental control F Spitz, EEM Furlong Nature reviews genetics 13 (9), 613-626, 2012 | 2544 | 2012 |
| Gene expression during the life cycle of Drosophila melanogaster MN Arbeitman, EEM Furlong, F Imam, E Johnson, BH Null, BS Baker, ... Science 297 (5590), 2270-2275, 2002 | 1102 | 2002 |
| Ultrasensitive proteome analysis using paramagnetic bead technology CS Hughes, S Foehr, DA Garfield, EE Furlong, LM Steinmetz, J Krijgsveld Molecular systems biology 10 (10), 757, 2014 | 1085 | 2014 |
| Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development S Bonn, RP Zinzen, C Girardot, EH Gustafson, A Perez-Gonzalez, ... Nature genetics 44 (2), 148-156, 2012 | 609 | 2012 |
| Developmental enhancers and chromosome topology EEM Furlong, M Levine Science 361 (6409), 1341-1345, 2018 | 604 | 2018 |
| Enhancer loops appear stable during development and are associated with paused polymerase Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar, D Noordermeer, W Huber, ... Nature 512 (7512), 96-100, 2014 | 561 | 2014 |
| The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery HG Stunnenberg, S Abrignani, D Adams, M de Almeida, L Altucci, V Amin, ... Cell 167 (5), 1145-1149, 2016 | 546 | 2016 |
| Combinatorial binding predicts spatio-temporal cis-regulatory activity RP Zinzen, C Girardot, J Gagneur, M Braun, EEM Furlong Nature 462 (7269), 65-70, 2009 | 482 | 2009 |
| A core transcriptional network for early mesoderm development in Drosophila melanogaster T Sandmann, C Girardot, M Brehme, W Tongprasit, V Stolc, EEM Furlong Genes & development 21 (4), 436-449, 2007 | 362 | 2007 |
| The cis-regulatory dynamics of embryonic development at single-cell resolution DA Cusanovich, JP Reddington, DA Garfield, RM Daza, D Aghamirzaie, ... Nature 555 (7697), 538-542, 2018 | 358 | 2018 |
| Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression Y Ghavi-Helm, A Jankowski, S Meiers, RR Viales, JO Korbel, ... Nature genetics 51 (8), 1272-1282, 2019 | 347 | 2019 |
| Patterns of gene expression during Drosophila mesoderm development EEM Furlong, EC Andersen, B Null, KP White, MP Scott Science 293 (5535), 1629-1633, 2001 | 345 | 2001 |
| A transcription factor collective defines cardiac cell fate and reflects lineage history G Junion, M Spivakov, C Girardot, M Braun, EH Gustafson, E Birney, ... Cell 148 (3), 473-486, 2012 | 312 | 2012 |
| The role of transcription in shaping the spatial organization of the genome B van Steensel, EEM Furlong Nature reviews Molecular cell biology 20 (6), 327-337, 2019 | 304 | 2019 |
| Conservation of transcription factor binding specificities across 600 million years of bilateria evolution KR Nitta, A Jolma, Y Yin, E Morgunova, T Kivioja, J Akhtar, K Hens, ... elife 4, e04837, 2015 | 277 | 2015 |
| A temporal map of transcription factor activity: mef2 directly regulates target genes at all stages of muscle development T Sandmann, LJ Jensen, JS Jakobsen, MM Karzynski, MP Eichenlaub, ... Developmental cell 10 (6), 797-807, 2006 | 275 | 2006 |
| Shadow enhancers are pervasive features of developmental regulatory networks E Cannavò, P Khoueiry, DA Garfield, P Geeleher, T Zichner, ... Current Biology 26 (1), 38-51, 2016 | 272 | 2016 |
| The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription O Mikhaylichenko, V Bondarenko, D Harnett, IE Schor, M Males, ... Genes & development 32 (1), 42-57, 2018 | 257 | 2018 |
| Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila K Oktaba, L Gutiérrez, J Gagneur, C Girardot, AK Sengupta, EEM Furlong, ... Developmental cell 15 (6), 877-889, 2008 | 241 | 2008 |
| The road ahead in genetics and genomics AL McGuire, S Gabriel, SA Tishkoff, A Wonkam, A Chakravarti, ... Nature Reviews Genetics 21 (10), 581-596, 2020 | 206 | 2020 |
