Matthew E. Monroe
Matthew E. Monroe
Verified email at pnnl.gov
Title
Cited by
Cited by
Year
Identification of proteins in human cytomegalovirus (HCMV) particles: the HCMV proteome
SM Varnum, DN Streblow, ME Monroe, P Smith, KJ Auberry, L Paša-Tolić, ...
Journal of virology 78 (20), 10960-10966, 2004
6652004
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
4242016
Human Plasma N-Glycoproteome Analysis by Immunoaffinity Subtraction, Hydrazide Chemistry, and Mass Spectrometry
T Liu, WJ Qian, MA Gritsenko, DG Camp, ME Monroe, RJ Moore, ...
Journal of proteome research 4 (6), 2070-2080, 2005
4222005
Reversed‐phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells
Y Wang, F Yang, MA Gritsenko, Y Wang, T Clauss, T Liu, Y Shen, ...
Proteomics 11 (10), 2019-2026, 2011
3622011
Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome
WJ Qian, T Liu, ME Monroe, EF Strittmatter, JM Jacobs, LJ Kangas, ...
Journal of proteome research 4 (1), 53-62, 2005
3602005
Advances in proteomics data analysis and display using an accurate mass and time tag approach
JSD Zimmer, ME Monroe, WJ Qian, RD Smith
Mass spectrometry reviews 25 (3), 450-482, 2006
3312006
Integrative analysis of the mitochondrial proteome in yeast
H Prokisch, C Scharfe, DG Camp II, W Xiao, L David, C Andreoli, ...
PLoS Biol 2 (6), e160, 2004
2322004
Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targets
JF Alfaro, CX Gong, ME Monroe, JT Aldrich, TRW Clauss, SO Purvine, ...
Proceedings of the National Academy of Sciences 109 (19), 7280-7285, 2012
2232012
VIPER: an advanced software package to support high-throughput LC-MS peptide identification
ME Monroe, N Tolić, N Jaitly, JL Shaw, JN Adkins, RD Smith
Bioinformatics 23 (15), 2021-2023, 2007
2132007
Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information
K Petritis, LJ Kangas, B Yan, ME Monroe, EF Strittmatter, WJ Qian, ...
Analytical chemistry 78 (14), 5026-5039, 2006
1902006
Quantitative proteome analysis of human plasma following in vivo lipopolysaccharide administration using 16O/18O labeling and the accurate mass and time tag approach
WJ Qian, ME Monroe, T Liu, JM Jacobs, GA Anderson, Y Shen, RJ Moore, ...
Molecular & Cellular Proteomics 4 (5), 700-709, 2005
1842005
Robust Algorithm for Alignment of Liquid Chromatography− Mass Spectrometry Analyses in an Accurate Mass and Time Tag Data Analysis Pipeline
N Jaitly, ME Monroe, VA Petyuk, TRW Clauss, JN Adkins, RD Smith
Analytical chemistry 78 (21), 7397-7409, 2006
1752006
High dynamic range characterization of the trauma patient plasma proteome
T Liu, WJ Qian, MA Gritsenko, W Xiao, LL Moldawer, A Kaushal, ...
Molecular & Cellular Proteomics 5 (10), 1899-1913, 2006
1502006
DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra
AM Mayampurath, N Jaitly, SO Purvine, ME Monroe, KJ Auberry, ...
Bioinformatics 24 (7), 1021-1023, 2008
1492008
Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem …
WJ Qian, JM Jacobs, DG Camp, ME Monroe, RJ Moore, MA Gritsenko, ...
Proteomics 5 (2), 572-584, 2005
1442005
Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations
E Kolker, AF Picone, MY Galperin, MF Romine, R Higdon, KS Makarova, ...
Proceedings of the National Academy of Sciences 102 (6), 2099-2104, 2005
1362005
Phosphoproteome profiling of human skin fibroblast cells in response to low-and high-dose irradiation
F Yang, DL Stenoien, EF Strittmatter, J Wang, L Ding, MS Lipton, ...
Journal of proteome research 5 (5), 1252-1260, 2006
1212006
Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach
R Fang, DA Elias, ME Monroe, Y Shen, M Mcintosh, P Wang, CD Goddard, ...
Molecular & Cellular Proteomics 5 (4), 714-725, 2006
1192006
Uncovering biologically significant lipid isomers with liquid chromatography, ion mobility spectrometry and mass spectrometry
JE Kyle, X Zhang, KK Weitz, ME Monroe, YM Ibrahim, RJ Moore, J Cha, ...
Analyst 141 (5), 1649-1659, 2016
1162016
The utility of accurate mass and LC elution time information in the analysis of complex proteomes
AD Norbeck, ME Monroe, JN Adkins, KK Anderson, DS Daly, RD Smith
Journal of the American Society for Mass Spectrometry 16 (8), 1239-1249, 2005
1122005
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Articles 1–20