Wolfgang Huber
Wolfgang Huber
EMBL - European Molecular Biology Laboratory
Verified email at embl.de - Homepage
Title
Cited by
Cited by
Year
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
MI Love, W Huber, S Anders
Genome biology 15 (12), 550, 2014
152682014
Bioconductor: open software development for computational biology and bioinformatics
RC Gentleman, VJ Carey, DM Bates, B Bolstad, M Dettling, S Dudoit, ...
Genome biology 5 (10), R80, 2004
115362004
Differential expression analysis for sequence count data
S Anders, W Huber
Nature Precedings, 1-1, 2010
102032010
HTSeq—a Python framework to work with high-throughput sequencing data
S Anders, PT Pyl, W Huber
Bioinformatics 31 (2), 166-169, 2015
79002015
Enterotypes of the human gut microbiome
M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ...
Nature 473 (7346), 174-180, 2011
46772011
Bioinformatics and computational biology solutions using R and Bioconductor
R Gentleman, V Carey, W Huber, R Irizarry, S Dudoit
Springer Science & Business Media, 2006
27812006
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
W Huber, A Von Heydebreck, H Sültmann, A Poustka, M Vingron
Bioinformatics 18 (suppl_1), S96-S104, 2002
21062002
gplots: Various R programming tools for plotting data
GR Warnes, B Bolker, L Bonebakker, R Gentleman, WHA Liaw, T Lumley, ...
16702015
Orchestrating high-throughput genomic analysis with Bioconductor
W Huber, VJ Carey, R Gentleman, S Anders, M Carlson, BS Carvalho, ...
Nature methods 12 (2), 115, 2015
15402015
Software for computing and annotating genomic ranges
M Lawrence, W Huber, H Pages, P Aboyoun, M Carlson, R Gentleman, ...
PLoS computational biology 9 (8), 2013
14102013
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
S Durinck, PT Spellman, E Birney, W Huber
Nature protocols 4 (8), 1184, 2009
10572009
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
S Durinck, Y Moreau, A Kasprzyk, S Davis, B De Moor, A Brazma, ...
Bioinformatics 21 (16), 3439-3440, 2005
10022005
Detecting differential usage of exons from RNA-seq data
S Anders, A Reyes, W Huber
Nature Precedings, 1-1, 2012
9202012
Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
S Anders, DJ McCarthy, Y Chen, M Okoniewski, GK Smyth, W Huber, ...
Nature protocols 8 (9), 1765, 2013
8622013
Bidirectional promoters generate pervasive transcription in yeast
Z Xu, W Wei, J Gagneur, F Perocchi, S Clauder-Münster, J Camblong, ...
Nature 457 (7232), 1033-1037, 2009
8162009
Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes
B Neumann, T Walter, HÃ Jean-Karim
Nature 464 (7289), 721-727, 2010
7452010
A high-resolution map of transcription in the yeast genome
L David, W Huber, M Granovskaia, J Toedling, CJ Palm, L Bofkin, T Jones, ...
Proceedings of the National Academy of Sciences 103 (14), 5320-5325, 2006
7392006
arrayQualityMetrics—a bioconductor package for quality assessment of microarray data
A Kauffmann, R Gentleman, W Huber
Bioinformatics 25 (3), 415-416, 2009
7222009
Variation in transcription factor binding among humans
M Kasowski, F Grubert, C Heffelfinger, M Hariharan, A Asabere, ...
science 328 (5975), 232-235, 2010
5882010
Independent filtering increases detection power for high-throughput experiments
R Bourgon, R Gentleman, W Huber
Proceedings of the National Academy of Sciences 107 (21), 9546-9551, 2010
5382010
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Articles 1–20