Jochen Supper
Jochen Supper
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Zitiert von
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
CA Brownstein, AH Beggs, N Homer, B Merriman, TW Yu, KC Flannery, ...
Genome biology 15 (3), 1-18, 2014
TDP-43 regulates global translational yield by splicing of exon junction complex component SKAR
FC Fiesel, SS Weber, J Supper, A Zell, PJ Kahle
Nucleic acids research 40 (6), 2668-2682, 2012
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ...
BMC Systems Biology 3 (1), 1-24, 2009
EDISA: extracting biclusters from multiple time-series of gene expression profiles
J Supper, M Strauch, D Wanke, K Harter, A Zell
BMC bioinformatics 8 (1), 1-14, 2007
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
A Dräger, N Hassis, J Supper, A Schröder, A Zell
BMC systems biology 2 (1), 1-7, 2008
BowTieBuilder: modeling signal transduction pathways
J Supper, L Spangenberg, H Planatscher, A Dräger, A Schröder, A Zell
BMC systems biology 3 (1), 1-13, 2009
Feedback memetic algorithms for modeling gene regulatory networks
C Spieth, F Streichert, J Supper, N Speer, A Zell
2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005
Detecting and visualizing gene fusions
J Supper, C Gugenmus, J Wollnik, T Drueke, M Scherf, A Hahn, K Grote, ...
Methods 59 (1), S24-S28, 2013
Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry
H Planatscher, J Supper, O Poetz, D Stoll, T Joos, MF Templin, A Zell
Algorithms for Molecular Biology 5 (1), 1-9, 2010
JCell—a Java-based framework for inferring regulatory networks from time series data
C Spieth, J Supper, F Streichert, N Speer, A Zell
Bioinformatics 22 (16), 2051-2052, 2006
Predicting DNA-binding specificities of eukaryotic transcription factors
A Schröder, J Eichner, J Supper, J Eichner, D Wanke, C Henneges, A Zell
PloS one 5 (11), e13876, 2010
A two-step clustering for 3-D gene expression data reveals the main features of the Arabidopsis stress response
M Strauch, J Supper, C Spieth, D Wanke, J Kilian, K Harter, A Zell
Journal of Integrative Bioinformatics 4 (1), 81-93, 2007
Inferring gene regulatory networks by machine learning methods
J Supper, H Fröhlich, C Spieth, A Dräger, A Zell
Proceedings of the 5th Asia-Pacific Bioinformatics Conference, 247-256, 2007
Reconstructing linear gene regulatory networks
J Supper, C Spieth, A Zell
European Conference on Evolutionary Computation, Machine Learning and Data …, 2007
Benchmarking evolutionary algorithms on convenience kinetics models of the Valine and Leucine Biosynthesis in C. glutamicum
A Drager, M Kronfeld, J Supper, H Planatscher, JB Magnus, M Oldiges, ...
2007 IEEE Congress on Evolutionary Computation, 896-903, 2007
Comparing various evolutionary algorithms on the parameter optimization of the valine and leucine biosynthesis in Corynebacterium glutamicum
A Drager, J Supper, H Planatscher, JB Magnus, M Oldiges, A Zell
2007 IEEE Congress on Evolutionary Computation, 620-627, 2007
Integrating biological perspectives: A quantum leap for microarray expression analysis
D Wanke, J Kilian, U Bloss, E Mangelsen, J Supper, K Harter, ...
Quantum Bio-Informatics II: From Quantum Information to Bio-Informatics, 327-344, 2009
The Analysis of Gene Expression and Cis-Regulatory Elements in Large Microarray Expression Datasets
D Wanke, J Kilian, J Supper, KW Berendzen, A Zell, K Harter
Quantum Bio-Informatics: From Quantum Information to Bio-Informatics, 294-314, 2008
Reverse Engineering Non-Linear Gene Regulatory Networks Based on the Bacteriophage λ cI Circuit
J Supper, C Spieth, A Zell
2005 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2005
Systems Biology Markup Language: Case Study of T-Cell Signal Transduction Network
A Tusek, Z Kurtanjek
2007 29th International Conference on Information Technology Interfaces, 651-656, 2007
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