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Florian Borchert
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GGPONC: A Corpus of German Medical Text with Rich Metadata Based on Clinical Practice Guidelines
F Borchert, C Lohr, L Modersohn, T Langer, M Follmann, JP Sachs, ...
Proceedings of the 11th International Workshop on Health Text Mining and …, 2020
212020
GGPONC 2.0—The German Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline NER Taggers
F Borchert, C Lohr, L Modersohn, J Witt, T Langer, M Follmann, M Gietzelt, ...
Proceedings of the Language Resources and Evaluation Conference, 3650-3660, 2022
162022
Knowledge bases and software support for variant interpretation in precision oncology
F Borchert, A Mock, A Tomczak, J Hügel, S Alkarkoukly, A Knurr, ...
Briefings in bioinformatics 22 (6), bbab134, 2021
132021
Medbert. de: A comprehensive german bert model for the medical domain
KK Bressem, JM Papaioannou, P Grundmann, F Borchert, LC Adams, ...
Expert Systems with Applications 237, 121598, 2024
62024
HPI-DHC@ BioASQ DisTEMIST: Spanish Biomedical Entity Linking with Pre-trained Transformers and Cross-lingual Candidate Retrieval
F Borchert, MP Schapranow
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the …, 2022
32022
Cross-Lingual Candidate Retrieval and Re-ranking for Biomedical Entity Linking
F Borchert, I Llorca, MP Schapranow
International Conference of the Cross-Language Evaluation Forum for European …, 2023
22023
A distributable German clinical corpus containing cardiovascular clinical routine doctor’s letters
P Richter-Pechanski, P Wiesenbach, DM Schwab, C Kiriakou, M He, ...
Scientific Data 10 (1), 207, 2023
22023
An engineering approach towards multi-site virtual molecular tumor board software
R Henkenjohann, B Bergner, F Borchert, N Bougatf, H Hund, R Eils, ...
International Conference on ICT for Health, Accessibility and Wellbeing, 156-170, 2021
22021
xMEN: A Modular Toolkit for Cross-Lingual Medical Entity Normalization
F Borchert, I Llorca, R Roller, B Arnrich, MP Schapranow
arXiv preprint arXiv:2310.11275, 2023
12023
HPI-DHC@ BC8 SympTEMIST Track: Detection and Normalization of Symptom Mentions with SpanMarker and xMEN
F Borchert, I Llorca, MP Schapranow
Proceedings of the BioCreative VIII Challenge and Workshop: Curation and …, 2023
12023
Controversial Trials First: Identifying Disagreement Between Clinical Guidelines and New Evidence
F Borchert, L Meister, T Langer, M Follmann, B Arnrich, MP Schapranow
AMIA Annual Symposium Proceedings 2021, 237, 2021
12021
Understanding emotions in the context of IT-based self-monitoring
D de Paula, F Borchert, A Sasso, F Uebernickel
arXiv preprint arXiv:2311.05449, 2023
2023
Triangulation of Questionnaires, Qualitative Data and Natural Language Processing: A Differential Approach to Religious Bahá’í Fasting in Germany
N Steckhan, R Ring, F Borchert, DA Koppold
Journal of Religion and Health, 1-14, 2023
2023
A Meta-dataset of German Medical Corpora: Harmonization of Annotations and Cross-corpus NER Evaluation
I Llorca, F Borchert, MP Schapranow
Proceedings of the 5th Clinical Natural Language Processing Workshop, 171-181, 2023
2023
Resolving Elliptical Compounds in German Medical Text
N Kammer, F Borchert, S Winkler, G De Melo, MP Schapranow
The 22nd Workshop on Biomedical Natural Language Processing and BioNLP …, 2023
2023
Machine Learning Based Prediction of Incident Cases of Crohn’s Disease Using Electronic Health Records from a Large Integrated Health System
J Hugo, S Ibing, F Borchert, JP Sachs, J Cho, RC Ungaro, EP Böttinger
International Conference on Artificial Intelligence in Medicine, 293-302, 2023
2023
GGTWEAK: Gene Tagging with Weak Supervision for German Clinical Text
S Steinwand, F Borchert, S Winkler, MP Schapranow
International Conference on Artificial Intelligence in Medicine, 183-192, 2023
2023
Tu1978 MACHINE LEARNING BASED PREDICTION OF INCIDENT CASES OF CROHN'S DISEASE USING ELECTRONIC HEALTH RECORDS FROM A LARGE INTEGRATED HEALTH SYSTEM
J Hugo, S Ibing, F Borchert, JP Sachs, RC Ungaro, EP Böttinger
Gastroenterology 164 (6), S-1170, 2023
2023
Software-Tool Support for Collaborative, Virtual, Multi-Site Molecular Tumor Boards
MP Schapranow, F Borchert, N Bougatf, H Hund, R Eils
SN Computer Science 4 (4), 358, 2023
2023
Programming techniques for improving rule readability for rule-based information extraction natural language processing pipelines of unstructured and semi-structured medical texts
N Ladas, F Borchert, S Franz, A Rehberg, N Strauch, KK Sommer, ...
Health Informatics Journal 29 (2), 14604582231164696, 2023
2023
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