| Genomic expansion of domain archaea highlights roles for organisms from new phyla in anaerobic carbon cycling CJ Castelle, KC Wrighton, BC Thomas, LA Hug, CT Brown, MJ Wilkins, ... Current biology 25 (6), 690-701, 2015 | 565 | 2015 |
| Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags MS Lipton, L Paša-Tolić, GA Anderson, DJ Anderson, DL Auberry, ... Proceedings of the National Academy of Sciences 99 (17), 11049-11054, 2002 | 499 | 2002 |
| Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling PP Łabaj, GG Leparc, BE Linggi, LM Markillie, HS Wiley, DP Kreil Bioinformatics 27 (13), i383-i391, 2011 | 181 | 2011 |
| Targeted Mutagenesis by Duplication Insertion in the Radioresistant Bacterium Deinococcus radiodurans: Radiation Sensitivities of Catalase (katA) and Superoxide … LM Markillie, SM Varnum, P Hradecky, KK Wong Journal of bacteriology 181 (2), 666-669, 1999 | 166 | 1999 |
| The Toxoplasma gondii Cyst Wall Protein CST1 Is Critical for Cyst Wall Integrity and Promotes Bradyzoite Persistence T Tomita, DJ Bzik, YF Ma, BA Fox, LM Markillie, RC Taylor, K Kim, ... PLoS pathogens 9 (12), e1003823, 2013 | 161 | 2013 |
| Conservation of protein abundance patterns reveals the regulatory architecture of the EGFR-MAPK pathway T Shi, M Niepel, JE McDermott, Y Gao, CD Nicora, WB Chrisler, ... Science Signaling 9 (436), rs6-rs6, 2016 | 137 | 2016 |
| Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 KM DeAngelis, D Sharma, R Varney, B Simmons, NG Isern, LM Markilllie, ... Frontiers in Microbiology 4, 280, 2013 | 134 | 2013 |
| Intracellular pathways for lignin catabolism in white-rot fungi C Del Cerro, E Erickson, T Dong, AR Wong, EK Eder, SO Purvine, ... Proceedings of the National Academy of Sciences 118 (9), e2017381118, 2021 | 114 | 2021 |
| High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip J Woo, SM Williams, LM Markillie, S Feng, CF Tsai, V Aguilera-Vazquez, ... Nature communications 12 (1), 6246, 2021 | 112 | 2021 |
| Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing AS Beliaev, MF Romine, M Serres, HC Bernstein, BE Linggi, LM Markillie, ... The ISME journal 8 (11), 2243-2255, 2014 | 103 | 2014 |
| Cellular recognition and trafficking of amorphous silica nanoparticles by macrophage scavenger receptor A GA Orr, WB Chrisler, KJ Cassens, R Tan, BJ Tarasevich, LM Markillie, ... Nanotoxicology 5 (3), 296-311, 2011 | 86 | 2011 |
| The highly conserved MraZ protein is a transcriptional regulator in Escherichia coli JM Eraso, LM Markillie, HD Mitchell, RC Taylor, G Orr, W Margolin Journal of bacteriology 196 (11), 2053-2066, 2014 | 79 | 2014 |
| Overexpression of multi-heme c-type cytochromes L Shi, JT Lin, LM Markillie, TC Squier, BS Hooker Biotechniques 38 (2), 297-299, 2005 | 68 | 2005 |
| Multiple mechanisms drive phage infection efficiency in nearly identical hosts C Howard-Varona, KR Hargreaves, NE Solonenko, LM Markillie, ... The ISME Journal 12 (6), 1605-1618, 2018 | 58 | 2018 |
| Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria RC Taylor, BJM Webb Robertson, LM Markillie, MH Serres, BE Linggi, ... Integrative biology 5 (11), 1393-1406, 2013 | 56 | 2013 |
| Regulation of infection efficiency in a globally abundant marine Bacteriodetes virus C Howard-Varona, S Roux, H Dore, NE Solonenko, K Holmfeldt, ... The ISME journal 11 (1), 284-295, 2017 | 53 | 2017 |
| Unlocking the constraints of cyanobacterial productivity: acclimations enabling ultrafast growth HC Bernstein, RS McClure, EA Hill, LM Markillie, WB Chrisler, MF Romine, ... MBio 7 (4), 10.1128/mbio. 00949-16, 2016 | 44 | 2016 |
| Dynamic motion of helix A in the amino-terminal domain of calmodulin is stabilized upon calcium activation B Chen, MU Mayer, LM Markillie, DL Stenoien, TC Squier Biochemistry 44 (3), 905-914, 2005 | 43 | 2005 |
| Distinct Strains of Toxoplasma gondii Feature Divergent Transcriptomes Regardless of Developmental Stage MMK Croken, Y Ma, LM Markillie, RC Taylor, G Orr, LM Weiss, K Kim PLoS One 9 (11), e111297, 2014 | 41 | 2014 |
| Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics BM Hess, J Xue, LM Markillie, RC Taylor, HS Wiley, BK Ahring, B Linggi PLoS One 8 (6), e66104, 2013 | 40 | 2013 |
