| Stochastic models coupling gene expression and partitioning in cell division in Escherichia coli ISC Baptista, AS Ribeiro BioSystems 193, 104154, 2020 | 11 | 2020 |
| Analytical kinetic model of native tandem promoters in E. coli V Chauhan, MNM Bahrudeen, CSD Palma, ISC Baptista, BLB Almeida, ... PLOS Computational Biology 18 (1), e1009824, 2022 | 8 | 2022 |
| Sequence-dependent model of genes with dual σ factor preference ISC Baptista, V Kandavalli, V Chauhan, MNM Bahrudeen, BLB Almeida, ... Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1865 (3), 194812, 2022 | 6* | 2022 |
| Alteration of DNA supercoiling serves as a trigger of short-term cold shock repressed genes of E. coli S Dash, CSD Palma, ISC Baptista, BLB Almeida, MNM Bahrudeen, ... Nucleic Acids Research 50 (15), 8512-8528, 2022 | 4* | 2022 |
| The transcription factor network of E. coli steers global responses to shifts in RNAP concentration B LB Almeida, MN M. Bahrudeen, V Chauhan, S Dash, V Kandavalli, ... Nucleic Acids Research 50 (12), 6801-6819, 2022 | 1 | 2022 |
| Efficiency and Robustness of Processes Driven by Nucleoid Exclusion in Escherichia coli I Baptista, V Chauhan, B Almeida, V Kandavalli, AS Ribeiro Physical Microbiology, 59-80, 2020 | 1 | 2020 |
| Transcription attenuation in synthetic promoters in tandem formation V Chauhan, ISC Baptista, R Jagadeesan, S Dash, AS Ribeiro bioRxiv, 2023.12. 05.569149, 2023 | | 2023 |
| A library of reporters of the global regulators of gene expression of Escherichia coli S Dash, R Jagadeesan, ISC Baptista, V Chauhan, V Kandavalli, ... bioRxiv, 2023.11. 28.568972, 2023 | | 2023 |
| Dynamics of bacterial operons during genome-wide stresses R Jagadeesan, S Dash, C Palma, ISC Baptista, V Chauhan, J Makela, ... bioRxiv, 2023.08. 24.554578, 2023 | | 2023 |
| Single cell, over-time protein numbers of cold shock repressed genes in Escherichia coli S Dash, CSD Palma, IC Baptista, AS Ribeiro EMBL Conference: From Functional Genomics to Systems Biology, 2020 | | 2020 |
| Regulatory mechanisms of the dynamics of closely spaced promoters in E. coli CSD Palma, MNM Bahrudeen, V Chauhan, I Baptista, S Dash, B Almeida, ... The 1st International BioDesign Research Conference, 2020 | | 2020 |
| Genome-wide responses of Escherichia coli to changing RNA polymerase concentrations BL de Brito Almeida, IC Baptista, CSD Palma, V Kandavalli, ... Congress of microbiology and biotechnology 2019 (Microbiotec’19), 2019 | | 2019 |
| Efficiency and Robustness to Nonoptimal Temperatures of Nucleoid Exclusion Processes in Escherichia coli IC Baptista, BL de Brito Almeida, AS Ribeiro EMBO| EMBL Symposium: New Approaches and Concepts in Microbiology, 2019 | | 2019 |
| Efficiency and Robustness to Nonoptimal Temperatures of Nucleoid Exclusion Processes in Escherichia coli I Calado Baptista | | 2019 |
| Inferring RNA production rates and rate-limiting steps in transcription from single-cell, single-RNA microscopy images at two time moments MM Bahrudeen, I Baptista, AS Ribeiro | | 2018 |
Andre S. RibeiroTampere UniversityVerified email at tuni.fi
