| Full-length transcriptome assembly from RNA-Seq data without a reference genome MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644, 2011 | 11215 | 2011 |
| Comprehensive mapping of long-range interactions reveals folding principles of the human genome E Lieberman-Aiden, NL Van Berkum, L Williams, M Imakaev, T Ragoczy, ... science 326 (5950), 289-293, 2009 | 5453 | 2009 |
| Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, ... Nature 458 (7235), 223-227, 2009 | 3852 | 2009 |
| A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response M Huarte, M Guttman, D Feldser, M Garber, MJ Koziol, ... Cell 142 (3), 409-419, 2010 | 1919 | 2010 |
| lincRNAs act in the circuitry controlling pluripotency and differentiation M Guttman, J Donaghey, BW Carey, M Garber, JK Grenier, G Munson, ... Nature 477 (7364), 295-300, 2011 | 1824 | 2011 |
| Host microbiota constantly control maturation and function of microglia in the CNS D Erny, ALH de Angelis, D Jaitin, P Wieghofer, O Staszewski, E David, ... Nature neuroscience 18 (7), 965-977, 2015 | 1330 | 2015 |
| A unique microglia type associated with restricting development of Alzheimer’s disease H Keren-Shaul, A Spinrad, A Weiner, O Matcovitch-Natan, ... Cell 169 (7), 1276-1290. e17, 2017 | 1296 | 2017 |
| Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment Y Lavin, D Winter, R Blecher-Gonen, E David, H Keren-Shaul, M Merad, ... Cell 159 (6), 1312-1326, 2014 | 1289 | 2014 |
| Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types DA Jaitin, E Kenigsberg, H Keren-Shaul, N Elefant, F Paul, I Zaretsky, ... Science 343 (6172), 776-779, 2014 | 1207 | 2014 |
| Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data MG Grabherr, BJ Haas, M Yassour, JZ Levin, DA Thompson, I Amit, ... Nature biotechnology 29 (7), 644, 2011 | 1091 | 2011 |
| Derivation of novel human ground state naive pluripotent stem cells O Gafni, L Weinberger, AAF Mansour, YS Manor, E Chomsky, ... Nature 504 (7479), 282-286, 2013 | 881 | 2013 |
| Science forum: the human cell atlas A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ... Elife 6, e27041, 2017 | 844 | 2017 |
| m6A mRNA methylation facilitates resolution of naïve pluripotency toward differentiation S Geula, S Moshitch-Moshkovitz, D Dominissini, AAF Mansour, N Kol, ... Science 347 (6225), 1002-1006, 2015 | 783 | 2015 |
| Transcriptional heterogeneity and lineage commitment in myeloid progenitors F Paul, Y Arkin, A Giladi, DA Jaitin, E Kenigsberg, H Keren-Shaul, ... Cell 163 (7), 1663-1677, 2015 | 708 | 2015 |
| Microglia development follows a stepwise program to regulate brain homeostasis O Matcovitch-Natan, DR Winter, A Giladi, SV Aguilar, A Spinrad, ... Science 353 (6301), 2016 | 583 | 2016 |
| Chromatin state dynamics during blood formation D Lara-Astiaso, A Weiner, E Lorenzo-Vivas, I Zaretsky, DA Jaitin, E David, ... science 345 (6199), 943-949, 2014 | 580 | 2014 |
| Deterministic direct reprogramming of somatic cells to pluripotency Y Rais, A Zviran, S Geula, O Gafni, E Chomsky, S Viukov, AAF Mansour, ... Nature 502 (7469), 65-70, 2013 | 554 | 2013 |
| Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19 M Liao, Y Liu, J Yuan, Y Wen, G Xu, J Zhao, L Cheng, J Li, X Wang, ... Nature medicine 26 (6), 842-844, 2020 | 551 | 2020 |
| A module of negative feedback regulators defines growth factor signaling I Amit, A Citri, T Shay, Y Lu, M Katz, F Zhang, G Tarcic, D Siwak, J Lahad, ... Nature genetics 39 (4), 503-512, 2007 | 513 | 2007 |
| Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses I Amit, M Garber, N Chevrier, AP Leite, Y Donner, T Eisenhaure, ... Science 326 (5950), 257-263, 2009 | 491 | 2009 |
