| ModBase, a database of annotated comparative protein structure models, and associated resources U Pieper, BM Webb, DT Barkan, D Schneidman-Duhovny, A Schlessinger, ... Nucleic acids research 39 (suppl 1), D465-D474, 2011 | 633* | 2011 |
| UCSF Chimera, MODELLER, and IMP: An integrated modeling system Z Yang, K Lasker, D Schneidman-Duhovny, B Webb, CC Huang, ... Journal of structural biology 179 (3), 269-278, 2012 | 394 | 2012 |
| Allosteric transitions of supramolecular systems explored by network models: application to chaperonin GroEL Z Yang, P Májek, I Bahar PLoS computational biology 5 (4), e1000360, 2009 | 139 | 2009 |
| Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL C Chennubhotla, Z Yang, I Bahar Molecular BioSystems 4 (4), 287-292, 2008 | 105 | 2008 |
| Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity Z Yang, I Bahar, M Widom Biophysical journal 96 (11), 4438-4448, 2009 | 35 | 2009 |
| FlexE: Using elastic network models to compare models of protein structure A Perez, Z Yang, I Bahar, K Dill, J MacCallum Journal of Chemical Theory and Computation, 2012 | 19 | 2012 |
| Elastic Network Models for Biomolecular Dynamics: Theory and Application to Membrane Proteins and Viruses TR Lezon, IH Shrivastava, Z Yang, I Bahar Handbook on Biological Networks, 129-158, 2009 | 12 | 2009 |
| Macromolecular assembly structures by comparative modeling and electron microscopy K Lasker, JA Velázquez-Muriel, BM Webb, Z Yang, TE Ferrin, A Sali Methods in Molecular Biology: Homology Modeling 857, 331-350, 2012 | 7 | 2012 |
| In silico Approaches to Structure and Function of Cell Components and their Assemblies| Coarse-Grained Methods: Applications to Allosteric Proteins P Doruker, Y Liu, Z Yang, I Bahar Comprehensive Biophysics 9, 2012 | | 2012 |
| Symmetry, Dynamics and Function: Biological Macromolecules Studied By Elastic Network Models Z Yang University of Pittsburgh, 2009 | | 2009 |
| Generating transition pathways by iterative implementation of deformations along dominant collective modes Z Yang, C Chennubhotla, I Bahar BIOPHYSICAL JOURNAL, 407A-407A, 2007 | | 2007 |
