Zheng Yang
Zheng Yang
.
Verified email at cgl.ucsf.edu
Title
Cited by
Cited by
Year
ModBase, a database of annotated comparative protein structure models, and associated resources
U Pieper, BM Webb, DT Barkan, D Schneidman-Duhovny, A Schlessinger, ...
Nucleic acids research 39 (suppl 1), D465-D474, 2011
633*2011
UCSF Chimera, MODELLER, and IMP: An integrated modeling system
Z Yang, K Lasker, D Schneidman-Duhovny, B Webb, CC Huang, ...
Journal of structural biology 179 (3), 269-278, 2012
3942012
Allosteric transitions of supramolecular systems explored by network models: application to chaperonin GroEL
Z Yang, P Májek, I Bahar
PLoS computational biology 5 (4), e1000360, 2009
1392009
Coupling between global dynamics and signal transduction pathways: a mechanism of allostery for chaperonin GroEL
C Chennubhotla, Z Yang, I Bahar
Molecular BioSystems 4 (4), 287-292, 2008
1052008
Vibrational dynamics of icosahedrally symmetric biomolecular assemblies compared with predictions based on continuum elasticity
Z Yang, I Bahar, M Widom
Biophysical journal 96 (11), 4438-4448, 2009
352009
FlexE: Using elastic network models to compare models of protein structure
A Perez, Z Yang, I Bahar, K Dill, J MacCallum
Journal of Chemical Theory and Computation, 2012
192012
Elastic Network Models for Biomolecular Dynamics: Theory and Application to Membrane Proteins and Viruses
TR Lezon, IH Shrivastava, Z Yang, I Bahar
Handbook on Biological Networks, 129-158, 2009
122009
Macromolecular assembly structures by comparative modeling and electron microscopy
K Lasker, JA Velázquez-Muriel, BM Webb, Z Yang, TE Ferrin, A Sali
Methods in Molecular Biology: Homology Modeling 857, 331-350, 2012
72012
In silico Approaches to Structure and Function of Cell Components and their Assemblies| Coarse-Grained Methods: Applications to Allosteric Proteins
P Doruker, Y Liu, Z Yang, I Bahar
Comprehensive Biophysics 9, 2012
2012
Symmetry, Dynamics and Function: Biological Macromolecules Studied By Elastic Network Models
Z Yang
University of Pittsburgh, 2009
2009
Generating transition pathways by iterative implementation of deformations along dominant collective modes
Z Yang, C Chennubhotla, I Bahar
BIOPHYSICAL JOURNAL, 407A-407A, 2007
2007
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Articles 1–11