| Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells JC Rivera-Mulia, Q Buckley, T Sasaki, J Zimmerman, RA Didier, K Nazor, ... Genome research 25 (8), 1091-1103, 2015 | 154 | 2015 |
| Replication timing networks reveal a link between transcription regulatory circuits and replication timing control JC Rivera-Mulia, S Kim, H Gabr, A Chakraborty, F Ay, T Kahveci, ... Genome research 29 (9), 1415-1428, 2019 | 15 | 2019 |
| PReach: reachability in probabilistic signaling networks H Gabr, A Todor, H Zandi, A Dobra, T Kahveci Proceedings of the International Conference on Bioinformatics, Computational …, 2013 | 10 | 2013 |
| Characterization of probabilistic signaling networks through signal propagation H Gabr, T Kahveci 2014 IEEE 4th International Conference on Computational Advances in Bio and …, 2014 | 7 | 2014 |
| Computing interaction probabilities in signaling networks H Gabr, JC Rivera-Mulia, DM Gilbert, T Kahveci EURASIP Journal on Bioinformatics and Systems Biology 2015, 1-11, 2015 | 6 | 2015 |
| Reachability analysis in probabilistic biological networks H Gabr, A Todor, A Dobra, T Kahveci IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (1), 53-66, 2014 | 6 | 2014 |
| Large scale analysis of signal reachability A Todor, H Gabr, A Dobra, T Kahveci Bioinformatics 30 (12), i96-i104, 2014 | 6 | 2014 |
| Signal reachability facilitates characterization of probabilistic signaling networks H Gabr, T Kahveci BMC bioinformatics 16, 1-12, 2015 | 5 | 2015 |
| Replication Timing Networks: a novel class of gene regulatory networks JC Rivera-Mulia, S Kim, H Gabr, T Kahveci, DM Gilbert BioRxiv, 186866, 2017 | 4 | 2017 |
| Estimating reachability in dense biological networks H Gabr, A Dobra, T Kahveci Proceedings of the 6th ACM Conference on Bioinformatics, Computational …, 2015 | 4 | 2015 |
| FROM UNCERTAIN PROTEIN INTERACTION NETWORKS TO SIGNALING PATHWAYS THROUGH INTENSIVE COLOR CODING H Gabr, A Dobra, T Kahveci | 3 | |
| Publication Year: 2015 JC Rivera-Mulia, Q Buckley, T Sasaki, J Zimmerman, KN Didier, JF Loring, ... | | 2015 |
| Modeling and characterization of probabilistic biological networks H Gabr University of Florida, 2015 | | 2015 |
| Reachability analysis in large probabilistic biological networks A Todor, H Gabr, A Dobra, T Kahveci Proceedings of the International Conference on Bioinformatics, Computational …, 2013 | | 2013 |
