Mehmet Ilyas Cosacak
Mehmet Ilyas Cosacak
PhD student
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IL4/STAT6 signaling activates neural stem cell proliferation and neurogenesis upon Amyloid-β42 aggregation in adult zebrafish brain
P Bhattarai, AK Thomas, MI Cosacak, C Papadimitriou, V Mashkaryan, ...
Cell reports 17 (4), 941-948, 2016
3D culture method for Alzheimer's disease modeling reveals interleukin-4 rescues Aβ42-induced loss of human neural stem cell plasticity
C Papadimitriou, H Celikkaya, MI Cosacak, V Mashkaryan, L Bray, ...
Developmental cell 46 (1), 85-101. e8, 2018
Glia-neuron interactions underlie state transitions to generalized seizures
CD Verdugo, S Myren-Svelstad, E Aydin, E Van Hoeymissen, ...
Nature communications 10 (1), 1-13, 2019
Single-cell transcriptomics analyses of neural stem cell heterogeneity and contextual plasticity in a zebrafish brain model of amyloid toxicity
MI Cosacak, P Bhattarai, S Reinhardt, A Petzold, A Dahl, Y Zhang, C Kizil
Cell reports 27 (4), 1307-1318. e3, 2019
Regeneration, plasticity, and induced molecular programs in adult zebrafish brain
MI Cosacak, C Papadimitriou, C Kizil
BioMed research international 2015, 2015
Modeling amyloid-β42 toxicity and neurodegeneration in adult zebrafish brain
P Bhattarai, AK Thomas, MI Cosacak, C Papadimitriou, V Mashkaryan, ...
JoVE (Journal of Visualized Experiments), e56014, 2017
Neuron-glia interaction through Serotonin-BDNF-NGFR axis enables regenerative neurogenesis in Alzheimer’s model of adult zebrafish brain
P Bhattarai, MI Cosacak, V Mashkaryan, S Demir, SD Popova, ...
PLoS biology 18 (1), e3000585, 2020
Human TAU P301L overexpression results in TAU hyperphosphorylation without neurofibrillary tangles in adult zebrafish brain
MI Cosacak, P Bhattarai, L Bocova, T Dzewas, V Mashkaryan, ...
Scientific reports 7 (1), 1-14, 2017
GATA3 promotes the neural progenitor state but not neurogenesis in 3D traumatic injury model of primary human cortical astrocytes
H Celikkaya, MI Cosacak, C Papadimitriou, S Popova, P Bhattarai, ...
Frontiers in cellular neuroscience 13, 23, 2019
Functional properties of habenular neurons are determined by developmental stage and sequential neurogenesis
S Fore, F Acuña-Hinrichsen, KA Mutlu, EM Bartoszek, B Serneels, ...
Science advances 6 (36), eaaz3173, 2020
Alzheimer’s disease, neural stem cells and neurogenesis: cellular phase at single-cell level
MI Cosacak, P Bhattarai, C Kizil
Neural regeneration research 15 (5), 824, 2020
Type 1 interleukin-4 signaling obliterates mouse astroglia in vivo but not in vitro
V Mashkaryan, T Siddiqui, S Popova, MI Cosacak, P Bhattarai, K Brandt, ...
Frontiers in cell and developmental biology 8, 114, 2020
Differentially expressed tRNA-derived small RNAs co-sediment primarily with non-polysomal fractions in Drosophila
Ç Göktaş, H Yiğit, Mİ Coşacak, B Akgül
Genes 8 (11), 333, 2017
Deep sequencing reveals two Jurkat subpopulations with distinct miRNA profiles during camptothecin-induced apoptosis
İ Erdoğan, Mİ Coşacak, AN Aldanmaz, B Akgül
Turkish Journal of Biology 42 (2), 113-122, 2018
Re-arrangements in the cytoplasmic distribution of small RNAs following the maternal-to-zygotic transition in Drosophila embryos
MI Cosacak, H Yiğit, C Kizil, B Akgül
Genes 9 (2), 82, 2018
Single cell analyses of the effects of Amyloid-beta42 and Interleukin-4 on neural stem/progenitor cell plasticity in adult zebrafish brain
MI Cosacak, P Bhattarai, Y Zhang, C Kizil
bioRxiv, 437467, 2018
Small RNA data set that includes tRNA-derived fragments from Jurkat cells treated with camptothecin
MI Cosacak, I Erdogan, A Nalbant, B Akgul
Data Brief 17, 397-400, 2018
Interleukin-4 restores neurogenic plasticity of the primary human neural stem cells through suppression of Kynurenic acid production upon Amyloid-beta42 toxicity
C Papadimitriou, H Celikkaya, MI Cosacak, V Mashkaryan, P Bhattarai, ...
bioRxiv, 227306, 2017
Instructive starPEG-Heparin biohybrid 3D cultures for modeling human neural stem cell plasticity, neurogenesis, and neurodegeneration
C Papadimitriou, MI Cosacak, V Mashkaryan, H Celikkaya, L Bray, ...
bioRxiv, 225243, 2017
Diversity and Function of Motile Ciliated Cell Types within Ependymal Lineages of the Zebrafish Brain
PP D'Gama, T Qiu, MI Cosacak, YL Chong, A Konac, JN Hansen, ...
bioRxiv, 2021
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